SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene740

Length: 1835 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene740

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	dual specificity protein phosphatase, putative (EC:3.1.3.16)	-	-	3.0e-11	27%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	48%
Blast2go	map kinase phosphatase	-	-	1.46473e-25	50%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Gelsolin	IPR007122	-	1.46473e-25	50%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5A8V6

Fln msg: your sequence is longer than subject: 362 - 115

Fln protein: MKELAAAVSNTVSQADMQNGIESAKQDIKFSSMDLSTSSSSPQSSPSSISSDSKFSSKSPSPSPSSLPFTPSSSSSVSWSPSSSSHSQSPVPDSMETFERSLNPSHISTKTFPSKVSPVSLAQRRGSVSPSLQLPVLGKNSFLGSRVLSKGSQVHPCVDERETVQKEGSQNSGAQYDLPHVPCSRSCHEREDHGLDSCNSRFPIFGLNIDTSWEGNSVSPSEVMIDAFIEENKSPCPIKPEQKSSCKWTRPMLYDWPKLESIDMFDIVDLDSSTIFLLLVPSQGHEDPEYANEVYVWVGCDLIADKQRNEVNNDGGETSEVYWMQIGRQFLERMDLKTDTPIRVVKEGEEPDKFWANFVNG*

Protein Length: 363

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGTTCCCTCTTCAGGAGCTGTATCCGAAACTCGTCTTCCAACAAGAGAAAATGGTTGGGGAATTCTGCGTCGTAAATTTGTGGCAGGAAAC_-_ATGAAAGAATTGGCTGCTGCAGTTTCAAATACAGTTTCCCAGGCAGACATGCAAAATGGCATCGAGTCTGCCAAGCAGGACATAAAATTCTCGTCTATGGATCTTTCAACATCTTCATCTTCTCCTCAGTCTTCACCAAGTTCCATTTCCTCAGATTCTAAATTTAGTTCAAAATCTCCTTCACCCTCTCCATCGTCTCTTCCTTTTACTCCCTCCTCTAGTTCCTCTGTTTCTTGGTCCCCATCCTCTTCATCTCATTCACAGTCTCCAGTGCCAGATTCAATGGAAACCTTTGAGAGATCTCTGAATCCTTCGCACATCAGTACAAAGACTTTTCCGTCAAAAGTCTCTCCAGTGTCTTTGGCACAAAGGCGGGGGAGTGTTTCCCCTTCTTTACAACTGCCAGTGTTAGGCAAAAATTCTTTTCTTGGTTCCAGAGTTTTGTCAAAAGGGTCTCAAGTTCATCCTTGTGTTGACGAGAGGGAGACAGTTCAGAAGGAAGGAAGTCAAAATTCTGGAGCTCAATATGATCTGCCTCATGTACCATGCAGTAGATCATGCCATGAGAGAGAAGATCATGGTTTAGACTCCTGTAATTCAAGGTTCCCAATATTTGGCCTGAATATAGATACTTCCTGGGAAGGAAATTCTGTTAGTCCTAGTGAAGTTATGATTGATGCTTTTATAGAAGAGAACAAGTCACCTTGCCCTATTAAGCCAGAGCAGAAGAGTAGCTGTAAATGGACACGACCAATGTTGTATGATTGGCCCAAGTTAGAAAGCATAGACATGTTTGATATAGTTGATCTTGATTCTAGTACAATTTTCCTTCTTCTAGTACCTAGCCAAGGACATGAAGATCCGGAATATGCCAATGAAGTCTATGTGTGGGTGGGTTGTGATTTGATTGCCGACAAACAAAGGAATGAAGTCAACAACGACGGGGGAGAAACAAGTGAAGTTTATTGGATGCAAATTGGACGTCAATTCCTCGAGCGAATGGATTTAAAGACAGATACTCCTATCAGGGTTGTTAAAGAGGGGGAAGAACCGGACAAGTTCTGGGCAAATTTTGTTAATGGTTGA___GTTCCTCTGCATGTACCATGGTTGTCTAGGCAAGTGCAGTAAATGAATGAAAAGTTATTTAGAATAGGTTTTTTCCCAGTGTAATTGCATCTGATTGGAAGGTTACACGCAATCTCTATCTCAAGCAGGACTCTATTGCGAAAGTGATTTTGGTGTATATTACAGGCAGTTGCCAACTGGAAAGCAGTTGTGGTGACAATTTTTAGTGATGCTGTTCCTTCATCAGTATGAACGCTTACAGATACAGCTCAGTTTCTAGAAGGAGATCATTTCAACACCTAAGGTGTTATTTCAGGGTTTTCCTTTGTACTTACATTTGCGAAAAGACAAGCGAATGAATCCTAGTTTCCATCATTATTCCAAAAAGGAAATGTATCTCCAAACGGCTCAGCTTCTAAATTTCTTATGTTTACATGGAGGCACTAGGAAATTGGCAACGGGTTGCAACCCGACAATTGACATGAGTTGTTACTGGGAAACTACTGCATTTATTTTTTTGTCACTTTATTGATTCTTTGAAAGTTGTCCCTGTTCTAGGTGAACTTGATAAATTATATGCACTCAGTTTCATGGTGGCATTGGAACTATGCTTAGATTGTGCTCCAAATCTAACAGAAAGATGAAGGCAGTTCTT

Fln Alignment:

sp_v1.1_unigene740___PMLYDWPKLESIDMFDIVDLDSSTIFLLLVPSQGHEDPEYANEVYVWVGCDLIADKQRNEVNNDGGETS--EVYWMQIGRQFLERMDLKTDTPIRVVKEGEEPDKFWANFVNG
D5A8V6_____________PILYEWPKMEKIDMFDADYLDSKAVFILLAPRKARGDAECAKVVYLWVGCDSVVEKDIVQVDGSIGRSQLRDTDWVKIGHDFLERMNLQQDIPIKVVRENEEPNEFWDNFISG

SNPs (tot: 23)

Position	A %	C %	G %	T %	Probability
1085	12			87	0.992554
1090			12	87	0.992554
1330		25	75		0.996473
1334	25		75		0.996473
1441			16	83	0.994512
1445	83	16			0.994512
1446			83	16	0.994512
1447	83			16	0.994512
1448			16	83	0.994512
1449	83		16		0.994512
1451	83			16	0.994512
1458		16		83	0.994512
1460		16		83	0.994512
1461	16	83			0.994512
1467		16	83		0.994512
1539	83			16	0.994512
1540	83	16			0.994512
1545		16		83	0.994512
1547		83		16	0.994512
1549	83		16		0.994512
1551		16		83	0.994512
1553			16	83	0.994512
1554		83		16	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain