SustainPineDB

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Assembly info
Unigenes
SNPs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene617

Length: 1035 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene617

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	MKP1; MKP1 (MITOGEN-ACTIVATED PROTEIN KINASE PHOSPHATASE 1); MAP kinase tyrosine/serine/threonine phosphatase	-	-	5.0e-06	36%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Blast2go	unknown [Picea sitchensis]	-	-	7.11075e-36	93%

Full-Lengther Next Prediction

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
476		33	66		0.997452
480	66		33		0.997452
483	66		33		0.997452
485		33		66	0.997452
488			66	33	0.997452
490			33	66	0.997452
493	66		33		0.997452
498	66	33			0.997452
499	66			33	0.997452
634		10		90	0.90298
635	90		10		0.90298
639	90		10		0.90298
640	10			90	0.90298
641		10	90		0.90298
644		90		10	0.90298
645			10	90	0.90298
652	10			90	0.90298
787		85	14		0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain