SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene601

Length: 1003 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene601

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF974 family protein	-	-	5.0e-37	29%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	69%
Blast2go	protein	-	-	0.0	65%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein of unknown function DUF974	IPR010378	-	0.0	65%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: tr_plants

Fln subject: D7UE86

Fln msg: Distance to subject end: 136 aas, your sequence is shorter than subject: 302 - 438

Fln protein: MSGGQGGSHSLAFRVMRLCRPSFQIDHPLRCDPFDLMLGEDFFDDDLQSPTALSSLLAEDDQSKEKDTYWRRFELESPLDAMGLSGLLVLPQAFGAIYLGEIFCSYVSVGNHSNYEVRDVVIKAEMQTERQRLVLSDTSKSPVESIRAGGRYDFIIEHDIKELGAHTLVCMAVYTDADGERKHLPQFFKFVVANPLSVRTKVRSVKESTFLEACIENHTKSHLYMDQVQFEPVQPWTATALTDDGDNSEVDSKIRDIFKAPDLIRANGGIRNYLYQLRQPSVDSRLVEVEGNNSLGKLQLTW

Protein Length: 303

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGTCCGCCGGCATCGATTTCTTAGTAGCTGAAGTGGATTTTGATGGTTGACAGTTGAAATTGACTCTGCAAGG_-_ATGAGCGGAGGGCAAGGGGGATCCCATTCCTTGGCCTTCAGGGTGATGCGTCTCTGCAGGCCCTCTTTCCAGATAGACCATCCATTGAGATGCGACCCATTTGATCTCATGCTCGGTGAAGATTTCTTCGATGATGACCTACAATCGCCTACAGCTCTGTCATCACTGCTTGCAGAGGATGATCAATCCAAAGAGAAGGATACCTACTGGAGGAGATTTGAACTGGAGAGCCCTCTAGATGCAATGGGCCTCTCCGGCCTCTTGGTACTCCCACAGGCATTTGGTGCAATATATCTGGGAGAGATATTCTGCAGCTATGTTAGTGTTGGTAATCACTCTAACTACGAAGTCAGAGACGTGGTCATTAAGGCAGAAATGCAAACAGAACGACAGCGGTTGGTACTTTCAGACACTTCAAAGTCACCCGTTGAGTCCATAAGAGCAGGGGGACGCTATGATTTCATAATAGAACACGACATTAAAGAATTAGGAGCACACACGCTGGTTTGTATGGCGGTGTACACTGATGCAGATGGGGAGCGGAAGCATCTTCCTCAGTTTTTCAAATTTGTGGTGGCTAATCCACTTTCAGTGAGAACAAAGGTGCGCTCTGTCAAGGAAAGCACATTTTTGGAAGCTTGCATTGAAAATCACACAAAGTCACATCTTTACATGGATCAGGTCCAATTTGAGCCTGTTCAACCTTGGACTGCAACTGCTTTGACAGATGATGGTGATAATTCTGAAGTTGATTCGAAAATTAGGGACATCTTCAAGGCACCAGATCTCATTAGAGCTAATGGGGGAATTCGAAATTACCTATATCAATTGAGACAGCCTTCTGTTGACTCTAGATTAGTGGAAGTTGAAGGAAaCAACAGCCTTGGCAAGCTTCAACTCACATGG

Fln Alignment:

sp_v1.1_unigene601___MSGGQGGSHSLAFRVMRLCRPSFQIDHPLRCDPFDLMLGEDFFDDDLQSPTALSSLLAEDDQSKEKD-TYWRRFELESPLDAMGLSGLLVLPQAFGAIYLGEIFCSYVSVGNHSNYEVRDVVIKAEMQTERQRLVLSDTSKSPVESIRAGGRYDFIIEHDIKELGAHTLVCMAVYTDADGERKHLPQFFKFVVANPLSVRTKVRSVKESTFLEACIENHTKSHLYMDQVQFEPVQPWTATALTDDGDNSEVDSKIRDIFKAPDLIRANGGIRNYLYQLRQPSVDSRLVEVEGNNSLGKLQLTW
D7UE86_____________MSSGQT-SHSLAFRVMRLCRPSFHVDNPLRLDPADLLAGEDIFDDPLAASDLPRLLHNHTLKSNDSDLTYRTRFLLNDPSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVRDVVIKAEIQTEKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCSALYNDGDGERKYLPQFFKFVVANPLSVKTKVRIVKDNTFLEACIENHTKSNLYMDQVEFEPSQHWTATVLKAGEGLSDNDSPTREIFKQPILIRSGGGIQNYLYQLKLSSQGSAQMKVDGSNVLGKLQITW

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
637	77	22			0.999999
641			77	22	0.999999
642	77		22		0.999999
644		22	77		0.999999
646	77			22	0.999999

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain