SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene514

Length: 1909 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene514

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Beta-fructofuranosidase, soluble isoenzyme I n=1 Tax=Daucus carota RepID=INVB_DAUCA	-	-	64%
FL-Next	sp=Beta-fructofuranosidase, soluble isoenzyme I; Daucus carota (Carrot).	-	-	64%
Blast2go	acid invertase	-	-	77%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: P80065

Fln msg: your sequence is shorter than subject: 547 - 661

Fln protein: PWTNAALSWQRTGFHFQPEKNWMNDPDGPLVYKGWYHLFYQYNPDSAIWGNITWGHAVSKDLVHWLYLDLAMVPDHWYDINGVWTGSATFLADGTIAMLYTGSTNESVQVQNLAFPENASDPLLQKWVKSEANPVIVPPEGIGLTDFRDPTTGWIGEDGAWRITIGSKLEMTGVALIFKTEDFVKYEEENILHSVNDTGMWECVDFYPVAASGVSGLDTSAVGVGVKHVLKASFDDDKHDYYAIGTYNVTSQKFIPDDPEMDVGLGLRYDYGKYYASKSFYDPVKERRILWGWIGETDSEQDDLRKGWASLQTIPRHIWFDNKTKTNIIQWPVEEIDELRSAAVVVENVLLQPGSVVEVNTTEAAQLDIELVIEFPEDTAAIDAAEDNALYNCSTSGGAAGRGVLGPFGLLVIAEKNLTEHTAVYFYVVKSANGKLQTFFCHDELRSSLATDLILGVHGSSVPVLANESISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTAVKVQSLNVWQMESVFLRPYQQLEEEHSVV*

Protein Length: 548

Fln nts: ATCCATGGACCAATGCTGCGCTCTCATGGCAGCGAACGGGGTTTCATTTTCAGCCCGAGAAGAATTGGATGAACGATCCAGACGGACCTTTGGTGTACAAGGGATGGTATCATCTGTTCTATCAATACAATCCGGACTCGGCGATTTGGGGGAACATAACATGGGGCCACGCTGTGTCGAAGGATCTGGTGCACTGGCTTTACCTGGATTTGGCCATGGTTCCCGATCATTGGTACGACATCAATGGCGTCTGGACGGGCTCCGCTACGTTCTTGGCAGACGGGACCATTGCTATGCTCTATACGGGATCCACGAACGAATCCGTTCAAGTCCAGAACTTGGCCTTTCCAGAGAACGCCTCCGATCCGCTTCTCCAGAAATGGGTGAAATCGGAGGCGAATCCTGTCATAGTCCCGCCCGAGGGCATAGGGCTCACGGATTTCAGGGATCCGACCACAGGCTGGATCGGCGAAGACGGAGCCTGGCGGATTACAATCGGATCGAAGCTCGAGATGACGGGCGTGGCACTGATTTTCAAGACGGAGGACTTCGTCAAGTATGAAGAAGAGAATATTTTGCATTCTGTTAACGACACTGGCATGTGGGAGTGCGTGGATTTCTATCCCGTGGCCGCCTCTGGAGTGTCGGGTTTGGACACATCTGCGGTTGGAGTAGGCGTTAAGCATGTGCTCAAAGCTAGCTTCGATGACGATAAGCATGATTATTACGCCATTGGAACTTACAATGTCACGAGCCAGAAATTTATCCCCGACGACCCTGAAATGGACGTCGGGCTGGGGCTGCGGTATGATTATGGAAAATATTATGCTTCCAAGTCTTTTTACGATCCAGTGAAGGAGAGAAGAATTCTTTGGGGATGGATAGGAGAAACTGACAGCGAGCAGGACGATCTTAGAAAAGGATGGGCTTCTTTGCAGACGATTCCTAGGCATATTTGGTTTGATAACAAGACGAAGACCAATATTATCCAATGGCCCGTCGAAGAAATTGACGAGCTGCGATCGGCTGCGGTTGTCGTCGAGAATGTTCTGCTCCAGCCGGGCTCTGTTGTGGAAGTCAATACAACCGAGGCTGCTCAGTTGGATATTGAGCTCGTTATTGAATTCCCTGAGGACACCGCTGCCATCGACGCGGCCGAAGATAATGCACTCTACAACTGCAGTACTAGCGGAGGGGCTGCCGGTAGAGGCGTGCTGGGACCGTTTGGGTTGCTGGTTATAGCTGAGAAAAATCTGACGGAACATACTGCCGTTTATTTCTATGTCGTGAAATCTGCTAACGGCAAATTGCAGACCTTCTTCTGCCATGATGAGTTGAGGTCCTCTCTGGCGACTGATCTCATCCTGGGAGTCCACGGGAGCTCCGTCCCGGTTCTTGCAAACGAAAGCATCTCGGTTCGAACCCTGGTCGACCATTCTATTGTGGAGAGCTATGCTCAGGGTGGGAGGCGGTGCATAACCTCTAGGGTGTATCCGACACAGGCTCTCGATGGTGCTGCTAAACTGTTTCTGTTCAACAACGCCACTACAGCAGTGAAAGTCCAGAGTCTGAATGTATGGCAGATGGAGAGTGTGTTCCTGCGTCCTTACCAGCAACTTGAAGAGGAGCATTCGGTGGTCTAA___ACGGTGGGTGGTCGTGTGATTGATCCCCGGGGTGTGTCTGTGTCTTGTTTGGCTTGTAATAAAGCCGGACTGGATTGAGGAATTTATTATTTGATTGTGATGTGAAAGAGTGTGGTCTGGGCATATGGATTTGCTTGGCTCTGGGCCACAGTGATGGGGAAGAAGCATCGCCAGGTTTATTTGCCACGTCATCATCTCCAATTAAGGAATATGTCTTTCTATGTAATTGAATTTATTAATAAATATCGAAAATTGAGTGATACTAC

Fln Alignment:

sp_v1.1_unigene514___PWTNAALSWQRTGFHFQPEKNWMNDPDGPLVYKGWYHLFYQYNPDSAIWGNITWGHAVSKDLVHWLYLDLAMVPDHWYDINGVWTGSATFLADGTIAMLYTGSTNESVQVQNLAFPENASDPLLQKWVKSEANPVIVPPEGIGLTDFRDPTTGWIGEDGAWRITIGSKLEMTGVALIFKTEDFVKYE-EENILHSVNDTGMWECVDFYPVAASGVSGLDTSAVGVGVKHVLKASFDDDKHDYYAIGTYNVTSQKFIPDDPEMDVGLGLRYDYGKYYASKSFYDPVKERRILWGWIGETDSEQDDLRKGWASLQTIPRHIWFDNKTKTNIIQWPVEEIDELRSAAVVVENVLLQPGSVVEVNTTEAAQLDIELVIEFPEDTAAIDAAEDNALYNCSTSGGAAGRGVLGPFGLLVIAEKNLTEHTAVYFYVVKSANGKLQTFFCHDELRSSLATDLILGVHGSSVPVLANESISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTAVKVQSLNVWQMESVFLRPY
P80065_____________PWTNDMLSWQRTSFHFQPQENWMNDPNGPLFHMGWYHLFYQYNPDSAIWGNITWGHAISRDLINWLHLPFAMQPDQWYDINGVWTGSATVLPDGKIVMLYTGDTDDLVQVQNLAYPANLSDPLLLDWIKYPDNPVMFPPPGIGSTDFRDPTTAWIGRDGKWRITIGSKVNKTGISLMYKTTDFITYELLDNLLHAVPGTGMWECVDFYPVSVTGSNGLDTSVNGPGVKHVLKSSLDDDRHDYYALGTYDPINDKWTPDNPELDVGIGLRLDYGKYYASKTFYDQDKERRLLWGWIGETDSESADLLKGWASVQSIPRTVVFDKKTGTNILQWPVKEVESLRSRSYEIDDVELKPGSLVPLKISSAAQLDIVASFEVDEE-AFKGTYEADASYNCTASEGAAGRGILGPFGILVLADDPLSELTPVYFYIAKGVDGNAKTYFCADQSRSSTASDVDKEVYGSDVPVLHGESLSMRLLVDHSIVESFAQGGRTVITSRVYPTRAIYSAARVFLFNNATGVSVTASVKAWQMASATLKPF

SNPs (tot: 23)

Position	A %	C %	G %	T %	Probability
474			88	11	0.923564
486	11	88			0.923564
666	20		80		1.0
674	83		16		1.0
716	22		77		1.0
882	77		22		0.999999
1010		30		70	1.0
1115		88		11	0.923564
1265		14		85	0.993533
1671		77		22	0.999999
1672	22		77		0.999999
1683		18	81		0.999994
1698	17			82	1.0
1728		18		81	1.0
1736	18		81		1.0
1766	85		14		0.999981
1781	23		76		1.0
1816	90		10		0.90298
1817		10	90		0.90298
1824		10		90	0.90298
1853			11	88	0.923564
1901	25			75	0.996473
1905	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain