SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene453

Length: 1580 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene453

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	L-tyrosine transporter n=2 Tax=Zea mays RepID=B6TS04_MAIZE	-	-	58%
FL-Next	tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice).	-	-	61%
Blast2go	tyrosine-specific transport protein	-	-	69%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Tryptophan/tyrosine permease	IPR018227	-	0.0	69%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: tr_plants

Fln subject: B8B8H0

Fln msg: Distance to subject end: 79 aas, your sequence is shorter than subject: 427 - 504

Fln protein: MLRARMLPSGFGLSQTAALSRDCKASGHCRFDLGLPSCYLLSTPLESRNELCWTLFNAKSKICSPSAHLFRTRVESHGTTLETDKKEEEEPKRDSGYSGAFWTAVGLIMGTAIGPGILGLPAATIKAGPLPSSLAILASWVYVIASILLVAEICCAVMEEQGLDEVSFTGLAMHTLGDNMGIVVAVIYAMLNYTLLVACIAGLGSLVLQWLPFLPPFMACLLFPGMVGGIIALASFNVIDGVNRCLCVLMATSISGLIAVGVLLRRHFIWESFKHAAWFPSVLLPAIPVTVLTLGFHVITPFICKVMGRDPYEVRKAILCGGAVPLAMVLSWNVVVLGLARSSPASRVLDPIKLLLSVNSSAVPAVQAFAFSALGTTLIGYALSFPKQLFDTLHLIKSIVQHHSEEFVKDFPYKGKLTKCQKIAMEL

Protein Length: 428

Fln nts: ATGGGGATATTTCCGTGGAGGACAAAAAGAAAATTCTATCAGAGAGTATGAGAATGCTTGCACCATCACAAACCTAAAGTTGCAACATGTTCTCAACCGCAGCACTCTCTCCATTCCGCTCAATGTGTGGCCAAACTTCCTGGCCTGGCATATTATGCGTTGTCCAACCAATTCCCAGGCCTTGGACATTGGTTACAGTCCGACATTCAAAACAATTGTGGACTTTGATTGAATTTTGACTTGATGCAAGGTTCCAAACAAACCTTCTGGACAGCCCTGTAAGCCACCTCATCGAAACC_-_ATGCTCAGAGCTCGGATGCTACCATCCGGGTTCGGGCTGAGCCAGACCGCAGCATTGTCCAGAGACTGTAAAGCATCCGGGCATTGCAGATTTGATTTGGGTTTACCTTCATGTTATCTATTATCAACTCCTTTGGAGAGTAGAAACGAACTCTGTTGGACATTGTTCAATGCAAAGTCGAAGATATGTAGCCCATCAGCGCATCTGTTTAGGACCAGAGTTGAATCCCATGGAACAACTCTAGAGACTGATAAGAAAGAGGAAGAAGAACCCAAAAGAGATTCAGGATATTCAGGTGCTTTCTGGACTGCTGTGGGTTTGATCATGGGCACTGCTATAGGACCTGGAATACTGGGTTTGCCTGCAGCAACAATTAAGGCAGGTCCCTTGCCATCATCTTTGGCAATTTTGGCCTCATGGGTCTATGTCATTGCTTCTATTTTGCTTGTCGCAGAGATCTGTTGTGCAGTCATGGAAGAGCAAGGATTGGATGAGGTGAGTTTTACAGGATTAGCAATGCATACATTGGGTGACAATATGGGAATTGTTGTTGCAGTAATTTATGCAATGTTGAACTATACTCTTTTGGTTGCTTGCATTGCTGGTCTCGGTTCCCTTGTTCTGCAGTGGTTGCCCTTTCTGCCTCCTTTCATGGCCTGTCTTCTGTTTCCGGGTATGGTGGGGGGAATTATAGCATTGGCATCGTTCAATGTAATCGATGGAGTAAATAGGTGTTTATGCGTTCTGATGGCTACATCCATTTCAGGGCTTATAGCGGTTGGAGTATTGTTAAGGAGGCATTTTATCTGGGAATCTTTCAAACATGCCGCGTGGTTTCCGAGTGTGCTTTTGCCTGCTATCCCTGTAACTGTGCTTACACTAGGGTTTCATGTGATAACTCCTTTTATATGCAAGGTCATGGGAAGAGATCCATATGAGGTTCGAAAGGCTATTCTATGTGGTGGAGCTGTACCTCTTGCAATGGTTTTATCATGGAATGTAGTTGTTTTAGGGCTTGCTAGGTCAAGTCCGGCTTCCAGGGTATTGGACCCAATAAAACTTTTGCTTTCTGTGAATTCCTCTGCCGTACCTGCAGTGCAAGCCTTCGCATTCTCAGCCCTTGGGACTACTTTGATAGGTTATGCCCTCAGCTTCCCTAAACAACTCTTTGATACCCTGCATTTGATCAAGTCTATTGTCCAGCACCATTCTGAGGAGTTTGTAAAGGATTTTCCCTACAAAGGGAAGTTGACAAAATGTCAAAAAATTGCAATGGAGCTG

Fln Alignment:

sp_v1.1_unigene453___GYSGAFWTAVGLIMGTAIGPGILGLPAATIKAGPLPSSLAILASWVYVIASILLVAEICCAVMEEQGLDEVSFTGLAMHTLGDNMGIVVAVIYAMLNYTLLVACIAGLGSLVLQWLPFLPPFMACLLFPGMVGGIIALASFNVIDGVNRCLCVLMATSISGLIAVGVLLRRHFIWESFKHAAWFPSVLLPAIPVTVLTLGFHVITPFICKVMGRDPYEVRKAILCGGAVPLAMVLSWNVVVLGLARSSPASRVLDPIKLLLSVNSSAVPAVQAFAFSALGTTLIGYALSFPKQLFDTLHLI
B8B8H0_____________GEKKSFWAAVSLIVGTAVGPGMLGLPSATIRSGPVPSTAAIVLSWVYVVSSIVLVAELSFAAMEDGGVDEVSFTGLASSTLGATLGAVVAVVYAALSFSLLVACVAGIGSLVSQLFPAVDPALANAIFPCFAGTLIAFFPFKAVDGANRALCGLMLASITALVVTGVSVGRSSMLRSLGYACWRPATILPAIPVTVLTLGFHVITPFICKIVGDSVYDARRAILIGGAVPLAMVLSWNAVILGLASSSGSARFDDPIKLLLSVNPAALPAVRGFAFAALATSLIGYAVSFPKQLADTVELI

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
1024	75		25		0.996473
1129		50		50	1.0
1133		25		75	0.996473
1317		50		50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain