SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene6

Length: 869 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene6

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	2-nitropropane dioxygenase family / NPD family	-	-	1.00053e-42	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Blast2go	2-nitropropane dioxygenase family	-	-	0.0	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to cadmium ion	GO:0046686	Biological Process	0.0	71%
Blast2go	response to symbiotic fungus	GO:0009610	Biological Process	0.0	71%

Source	InterPros	Term	Type	e value	Identity
Blast2go	2-nitropropane dioxygenase, NPD	IPR004136	-	0.0	71%
Blast2go	Aldolase-type TIM barrel	IPR013785	-	0.0	71%

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
278	80		20		0.995493
318	14		85		0.993533
328		11		88	0.923564
799		12		87	0.992554
831		25		75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain