SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene210511

Length: 194 nt

UniGene Fasta

>sp_v3.0_unigene210511
TGCTGCGCAAAGTGTCTGTGTGTTCCTCCAGGAACATACGGGAACAAGTGTGCCCCTGCTACAACAACTGGAAGACCAAGAGAGGAAGCCCAAAATGCCCATAGAATTTGTTCCAAACAGTTAATTGAATTGTAATTACTGTTTTCTGAAATGAAATTTGGTGCCAAGATTTTTGGATTGCAATCAAAAAGAAA

Ace file of the UniGene sp_v3.0_unigene210511

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Gibberellin induced protein (Fragment) n=5 Tax=Sonneratia RepID=A9XNT2_9MYRT	-	-	4.0e-12	90%
FL-Next	tr=Gasa5 like protein; Pinus pinaster (Maritime pine).	-	-	0.0	100%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G74670.1	Gibberellin-regulated family protein chr1:28053378-28053893 FORWARD LENGTH=101	1.0e-13	80%
RefSeq	Arabidopsis thaliana	NP_177605.2	putative gibberellin-regulated protein [Arabidopsis thaliana]	2.0e-13	80%
RefSeq	Populus trichocarpa	XP_002298301.1	predicted protein, partial [Populus trichocarpa]	9.0e-14	85%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: F4MKL6

Fln msg: Overlapping hits, possible frame ERROR between 48 and 42, your sequence is shorter than subject: 35 - 108

Fln protein: CCAKCLCVPPGTYxxxxCPCYNNWKTKRGSPKCP*

Protein Length: 36

Fln nts: TGCTGCGCAAAGTGTCTGTGTGTTCCTCCAGGAACATACxxxxxxxxxxxxTGCCCCTGCTACAACAACTGGAAGACCAAGAGAGGAAGCCCAAAATGCCCATAGAATTTGTTCCAAACAGTTAATTGAATTGTAATTACTGTTTTCTGAAATGAAATTTGGTGCCAAGATTTTTGGATTGCAATCAAAAAGAAA

Fln Alignment:

Tall_8m_euler_9732___CCAKCLCVPPGTYGNxQVCPCYNNWKTKRGSPKCP
F4MKL6________________CCAKCLCVPPGTYGNxQVCPCYNNWKTQQGGPKCP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain