SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene210367

Length: 1129 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene210367

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS	-	-	1.0e-34	68%
FL-Next	tr=Putative histone H1; Pinus pinaster (Maritime pine).	-	-	0.0	100%
Sma3	Putative histone H1	-	-	0.0	-

Source	Gene names
Sma3	h1;

Source	GOs	Term	Type	Identity
Sma3	nucleosome	GO:0000786	Cellular Component	-
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	DNA binding	GO:0003677	Molecular Function	-
Sma3	nucleosome assembly	GO:0006334	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Histone H1/H5	IPR005818	-	-
Sma3	Histone H5	IPR005819	-	-
Sma3	Winged helix-turn-helix transcription repressor DNA-binding	IPR011991	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G18050.1	HIS1-3 histone H1-3 chr2:7846095-7846670 FORWARD LENGTH=167	6.0e-17	58%
RefSeq	Arabidopsis thaliana	NP_179396.1	histone H1-3 [Arabidopsis thaliana]	7.0e-17	58%
RefSeq	Populus trichocarpa	XP_002327673.1	histone H1 [Populus trichocarpa]	6.0e-17	60%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain