SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene209790

Length: 248 nt

UniGene Fasta

>sp_v3.0_unigene209790
ACACCTCACCTCAAGAGTTTATCAGGTTCCATTGTCTCATTGAATTGGAGTCGTCAGTCGTCTGAGTTGTTCATTGAATTGGAGTCGTCAGTCATCTTTCAGTTGTTGCGAGACCGTTACAATGGTGGGGAGAAACAGTTTATCAGGTTCCATTTGGATCTCAGTGACACTGACATTATTCGCCATCAATGTTCATCTGCAAGTTGCCGAAGGGGCGCAATTCACAGTGAAGAACCAGTGCCCATACA

Ace file of the UniGene sp_v3.0_unigene209790

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Thaumatin-like protein L2 n=3 Tax=Pinus monticola RepID=D3IZ06_PINMO	-	-	2.0e-11	78%
FL-Next	tr=Thaumatin-like protein L2; Pinus monticola (Western white pine) (Strobus monticola).	-	-	0.0	78%

Source	InterPros	Term	Type	e value	Identity
Sma3	Thaumatin, pathogenesis-related	IPR001938	-	0.0	-
Sma3	Thaumatin, conserved site	IPR017949	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D3IZ06

Fln msg: Distance to subject end: 192 aas, your sequence is shorter than subject: 42 - 234

Fln protein: MVGRNSLSGSIWISVTLTLFAINVHLQVAEGAQFTVKNQCPY

Protein Length: 43

Fln nts: ACACCTCACCTCAAGAGTTTATCAGGTTCCATTGTCTCATTGAATTGGAGTCGTCAGTCGTCTGAGTTGTTCATTGAATTGGAGTCGTCAGTCATCTTTCAGTTGTTGCGAGACCGTTACA_-_ATGGTGGGGAGAAACAGTTTATCAGGTTCCATTTGGATCTCAGTGACACTGACATTATTCGCCATCAATGTTCATCTGCAAGTTGCCGAAGGGGCGCAATTCACAGTGAAGAACCAGTGCCCATACA

Fln Alignment:

Tip_euler_7666___MVGRNSLSGSIWISVTLTLFAINVHLQVAEGAQFTVKNQCPY
D3IZ06________________MAGRNSLSGSIWITVTVTLVAVNVYLQVAEGATFTVRNQCTY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain