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UniGene Name: sp_v3.0_unigene209100
Length: 243 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
 UniGene Fasta (sense)
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| >sp_v3.0_unigene209100
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Ace file of the UniGene sp_v3.0_unigene209100 (antisense)
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If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Probable glutathione S-transferase n=1 Tax=Picea mariana RepID=O65056_PICMA | - | - | 3.0e-21 | 79% |
| FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 81% |
| Sma3 | Glutathione S-transferase GSTU6 | - | - | 9.44e-38 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Glutathione transferase. | EC:2.5.1.18 | - | 0.0 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Glutathione metabolism | 00480 | 0.0 | % | |
| Sma3 | Metabolism of xenobiotics by cytochrome P450 | 00980 | 0.0 | % | |
| Sma3 | Drug metabolism - cytochrome P450 | 00982 | 0.0 | % | |
| Sma3 | Lactoylglutathione lyase. | EC:4.4.1.5 | - | 8.965e-20 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Pyruvate metabolism | 00620 | 8.965e-20 | % |
| Source | Gene names |
|---|---|
| Sma3 | 103-1A; At1g59670; At1g59700; At2g29420; At2g29440; At2g29450; B1147A04.22; ERD9; F16P2.17; F23H11.1; GST; GST180; GST1a; GST1b; GST1c; GST2; GST24; GST25; GST30; GST30b; GST33; GST34; GST35; GSTU1; GSTU3; GSTU5; GSTU8; GSTa; GSVIVT00000139001; GSVIVT0000 |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
| Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
| Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
| Sma3 | glutathione transferase activity | GO:0004364 | Molecular Function | 0.0 | - |
| Sma3 | transferase activity | GO:0016740 | Molecular Function | 0.0 | - |
| Sma3 | glutathione binding | GO:0043295 | Molecular Function | 0.0 | - |
| Sma3 | response to stress | GO:0006950 | Biological Process | 0.0 | - |
| Sma3 | defense response | GO:0006952 | Biological Process | 0.0 | - |
| Sma3 | response to oxidative stress | GO:0006979 | Biological Process | 0.0 | - |
| Sma3 | toxin catabolic process | GO:0009407 | Biological Process | 0.0 | - |
| Sma3 | response to biotic stimulus | GO:0009607 | Biological Process | 0.0 | - |
| Sma3 | auxin mediated signaling pathway | GO:0009734 | Biological Process | 0.0 | - |
| Sma3 | response to salicylic acid stimulus | GO:0009751 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Lipocalin | IPR002345 | - | 0.0 | - |
| Sma3 | Glutathione S-transferase, N-terminal | IPR004045 | - | 0.0 | - |
| Sma3 | Glutathione S-transferase, C-terminal | IPR004046 | - | 0.0 | - |
| Sma3 | Glutathione S-transferase, C-terminal-like | IPR010987 | - | 0.0 | - |
| Sma3 | IPR012335 | - | 0.0 | - | |
| Sma3 | Glutathione S-transferase/chloride channel, C-terminal | IPR017933 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT1G59700.1 | ATGSTU16, GSTU16 glutathione S-transferase TAU 16 chr1:21936459-21937763 FORWARD LENGTH=234 | 9.0e-19 | 60% |
| RefSeq | Arabidopsis thaliana | NP_176178.1 | glutathione S-transferase TAU 16 [Arabidopsis thaliana] | 1.0e-18 | 60% |
| RefSeq | Populus trichocarpa | XP_002301833.1 | predicted protein [Populus trichocarpa] | 6.0e-19 | 71% |
| Full-Lengther Next Prediction |
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Fln status: N-terminus
Fln database: coniferopsida.fasta
Fln subject: A9P2I2
Fln msg: Distance to subject end: 173 aas, your sequence is shorter than subject: 64 - 239
Fln protein:
M
Protein Length:
65
Fln nts:
A
Fln Alignment:
Hyp_os_Euler_2246___ITMEGCGEDGQVKLLGMVHSPFVLRVRIALALKGIHYQFVEENLQNKSELLLQSNPIHKKIPVLIH
A9P2I2________________MAMEACGEEGQVKLLGASISPFVLRVRIALALKGIHYEFIEENLLNKSQLLLQSNPVHKKIPVLIH
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
