SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene208972

Length: 502 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene208972 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Signal peptidase complex subunit, putative n=1 Tax=Ricinus communis RepID=B9RMF9_RICCO	-	-	2.0e-24	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%
Sma3	Putative uncharacterized protein	-	-	0.0	-

Source	GOs	Term	Type	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	microsome	GO:0005792	Cellular Component	-
Sma3	signal peptidase complex	GO:0005787	Cellular Component	-
Sma3	peptidase activity	GO:0008233	Molecular Function	-
Sma3	signal peptide processing	GO:0006465	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Microsomal signal peptidase 12kDa subunit	IPR009542	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G40042.1	Microsomal signal peptidase 12 kDa subunit (SPC12) chr4:18559289-18559570 FORWARD LENGTH=93	4.0e-29	58%
RefSeq	Arabidopsis thaliana	NP_680778.2	signal peptidase subunit-12 [Arabidopsis thaliana]	5.0e-29	58%
RefSeq	Populus trichocarpa	XP_002311714.1	predicted protein [Populus trichocarpa]	4.0e-32	60%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain