SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene208850

Length: 176 nt

UniGene Fasta

>sp_v3.0_unigene208850
ATGGGAATATCAGTGCAGTTAGAAGCTACTGGTGTTGGAGCTCAGAATGATCAAGCACAGCTTGCCCTCAGAAGAGCTGGAGAAATTGAAAACAAGTATAACATGATTGTTGCTAAGTTAGCTGTTGAATTAAGCCTAAAGCAAAGTACTATGGCAGAGCTTGAGTGGTATAAAGA

Ace file of the UniGene sp_v3.0_unigene208850

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	2.0e-17	79%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	79%

Source	GOs	Term	Type	e value	Identity
Sma3	triglyceride lipase activity	GO:0004806	Molecular Function	0.0	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipase, class 3	IPR002921	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NW04

Fln msg: Distance to subject end: 213 aas, your sequence is shorter than subject: 58 - 616

Fln protein: MGISVQLEATGVGAQNDQAQLALRRAGEIENKYNMIVAKLAVELSLKQSTMAELEWYK

Protein Length: 59

Fln nts: ATGGGAATATCAGTGCAGTTAGAAGCTACTGGTGTTGGAGCTCAGAATGATCAAGCACAGCTTGCCCTCAGAAGAGCTGGAGAAATTGAAAACAAGTATAACATGATTGTTGCTAAGTTAGCTGTTGAATTAAGCCTAAAGCAAAGTACTATGGCAGAGCTTGAGTGGTATAAAGA

Fln Alignment:

biogeco3_euler_17817___MGISVQLEATGVGAQNDQAQLALRRAGEIENKYNMIVAKLAVELSLKQSTMAELEWYK
A9NW04________________MGISLQLEAIGVGAQNDHAQFALRRAGETEDNYNTNVDKLAIELSLKQSSMAELEWYK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain