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UniGene Name: sp_v3.0_unigene208796
Length: 202 nt
 UniGene Fasta
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| >sp_v3.0_unigene208796
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Ace file of the UniGene sp_v3.0_unigene208796
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If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Probable aquaporin n=2 Tax=Picea RepID=Q3ZDL5_PICAB | - | - | 4.0e-24 | 74% |
| FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 82% |
| Sma3 | Plasma membrane intrinsic protein | - | - | 5.274e-36 | - |
| Source | Gene names |
|---|---|
| Sma3 | AQ1; AQP; AQP1; AQP2; AQP2.1; AQP3; AQP4; AQU; A_IG005I10.2; Aqp; Aqp1; Aqp2; At1g01620; At2g16850; At2g37170; At2g37180; At2g39010; At3g53420; At3g61430; At4g00430; At4g23400; At4g35100; At5g60660; B0103C08-B0602B01.9; B1469H02.22-1; F12A24.3; F16G20.100 |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | vacuole | GO:0005773 | Cellular Component | 0.0 | - |
| Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
| Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
| Sma3 | chloroplast envelope | GO:0009941 | Cellular Component | 0.0 | - |
| Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
| Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
| Sma3 | anchored to plasma membrane | GO:0046658 | Cellular Component | 0.0 | - |
| Sma3 | transporter activity | GO:0005215 | Molecular Function | 0.0 | - |
| Sma3 | water channel activity | GO:0015250 | Molecular Function | 0.0 | - |
| Sma3 | transport | GO:0006810 | Biological Process | 0.0 | - |
| Sma3 | water transport | GO:0006833 | Biological Process | 0.0 | - |
| Sma3 | response to water deprivation | GO:0009414 | Biological Process | 0.0 | - |
| Sma3 | response to nematode | GO:0009624 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Major intrinsic protein | IPR000425 | - | 0.0 | - |
| Sma3 | Aquaporin | IPR012269 | - | 0.0 | - |
| Sma3 | Aldehyde dehydrogenase, conserved site | IPR016160 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT2G16850.1 | " PIP3B, PIP2;8 plasma membrane intrinsic protein 2;8 chr2:7301647-7303180 FORWARD LENGTH=278" | 3.0e-29 | 67% |
| RefSeq | Arabidopsis thaliana | NP_179277.1 | putative aquaporin PIP2-8 [Arabidopsis thaliana] | 4.0e-29 | 67% |
| RefSeq | Populus trichocarpa | XP_002326182.1 | aquaporin, MIP family, PIP subfamily [Populus trichocarpa] | 8.0e-29 | 69% |
| Full-Lengther Next Prediction |
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Fln status: Putative C-terminus
Fln database: coniferopsida.fasta
Fln subject: D5A9R4
Fln msg: STOP codon was not found. Distance to subject end: 8 aas, your sequence is shorter than subject: 67 - 272
Fln protein:
A
Protein Length:
68
Fln nts:
G
Fln Alignment:
biogeco3_euler_16275___ALAPLSIGFAVFMVHLATIPVTGTG--------AAVIYGHKKSWDDHWIFWVGPLIGATVAAAFHKYVIRASLK
D5A9R4________________ALAPLSVGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKKSWNDHWIFWVGPLIGATIAAAFHKYVIRATLK
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
