SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene208564

Length: 626 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene208564

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative alpha-xylosidase n=1 Tax=Pinus pinaster RepID=Q8VWV9_PINPS	-	-	0.0	99%
FL-Next	tr=Putative alpha-xylosidase; Pinus pinaster (Maritime pine).	-	-	0.0	96%
Sma3	Alpha-glucosidase	-	-	8.599e-12	-

Source	ECs	Term	Type	e value	Identity
Sma3		EC:3.2.1.2-	-	3.006e-07	-

Source	Gene names
Sma3	Agl2; At1g68560; F16L2_150; F24J5.20; GSVIVT00030331001; Os01g0130400; OsI_00249; OsJ_00241; OsJ_22352; P0504H10.9; PHYPADRAFT_195732; POPTRDRAFT_1090916; POPTRDRAFT_564524; RCOM_0030540; VITISV_025206; XYL1; mal2;

Source	GOs	Term	Type	Identity
Sma3	plant-type cell wall	GO:0009505	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	apoplast	GO:0048046	Cellular Component	-
Sma3	hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0004553	Molecular Function	-
Sma3	alpha-glucosidase activity	GO:0004558	Molecular Function	-
Sma3	xylan 1,4-beta-xylosidase activity	GO:0009044	Molecular Function	-
Sma3	alpha-N-arabinofuranosidase activity	GO:0046556	Molecular Function	-
Sma3	carbohydrate metabolic process	GO:0005975	Biological Process	-
Sma3	xylan catabolic process	GO:0045493	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Glycoside hydrolase, family 31	IPR000322	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G68560.1	ATXYL1, XYL1, TRG1 alpha-xylosidase 1 chr1:25734435-25737897 REVERSE LENGTH=915	8.0e-32	69%
RefSeq	Arabidopsis thaliana	NP_177023.1	alpha-xylosidase 1 [Arabidopsis thaliana]	1.0e-31	69%
RefSeq	Populus trichocarpa	XP_002311455.1	predicted protein [Populus trichocarpa]	4.0e-34	70%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q8VWV9

Fln msg: Warning!, your query overlaps and the subject is separated, Distance to subject end: 48 aas, your sequence is shorter than subject: 208 - 910

Fln protein: SNPFGFAIKRKSNGDVLFNSSYGNLVFKDQYLEVTTGLPATASLYGLGENTQPNGIKILPKEAYTLYTTDISAINLNTDLYxxxxxxxNVHVCEGMILPMQRGGMTTTAARMTPFTLIIAFPLGFQSTGGKAKGHLFLDSGEDVDMKIAEGKSTYVDFSAESDGKKVRLVSQVESGSYGLSQGWVVEKLMILGLSKSHLSSQIAFQLD

Protein Length: 209

Fln nts: TTTCCAATCCATTTGGGTTTGCAATAAAGCGCAAATCCAATGGGGATGTGCTCTTCAACTCTTCCTATGGGAACTTGGTCTTCAAAGATCAGTACCTGGAGGTCACCACTGGCCTTCCTGCAACAGCTTCCCTGTATGGATTGGGCGAGAACACGCAGCCCAACGGGATCAAAATTCTTCCCAAAGAAGCTTATACCCTGTACACAACTGACATTTCTGCAATAAATCTGAATACAGATTTGTATxxxxxxxxxxxxxxxxxxxxxAATGTTCATGTGTGTGAGGGCATGATTCTGCCCATGCAAAGAGGGGGAATGACTACTACGGCGGCCAGGATGACCCCTTTCACTTTGATTATTGCGTTCCCACTGGGGTTCCAGTCTACGGGAGGGAAGGCCAAAGGCCATCTCTTTTTGGATTCGGGTGAAGATGTTGATATGAAGATTGCAGAGGGGAAGTCTACATATGTTGATTTCTCCGCCGAGTCGGATGGGAAGAAAGTGAGACTAGTGTCCCAGGTTGAGAGTGGATCGTATGGTCTTAGTCAAGGGTGGGTAGTGGAGAAATTGATGATCCTGGGACTCTCCAAATCTCATTTATCTTCTCAGATTGCATTCCAGTTGGATGG

Fln Alignment:

biogeco3_euler_2215___SNPFGFAIKRKSNGDVLFNSSYGNLVFKDQYLEVTTGLPATASLYGLGENTQPNGIKILPKEAYTLYTTDISAINLNTDLYGSHGYHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAPMDTINVHVCEGMILPMQRGGMTTTAARMTPFTLIIAFPLGFQSTGGKAKGHLFLDSGEDVDMKIAEGKSTYVDFSAESDGKKVRLVSQVESGSYGLSQGWVVEKLMILGLSKSHLSSQIAFQLD
Q8VWV9________________SNPFGFAIKRKSNGDVLFNSSYGNLVFKDQYLEVTTGLPATASLYGLGENTQPNGIKILPKEAYTLYTTDISAINLNTDLYGSHPFYxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAPMDTINVHVCEGMILPMQRGGMTTTVARMTPFTLIIAFPLGFQSTGGKAKGHLFLDSGEDVDMKIAEGKSTYVDFSAESDGKKVRLVSQVESGSYGLSQGWVVEKLMILGLSKSHLSSQIAFQLD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain