SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene208368

Length: 147 nt

UniGene Fasta

>sp_v3.0_unigene208368
TTGCTTTACAAACACTAGCTGGTGAAAATGATCAGCCAAAGATATACAAGGTTATTGCCAGAACACTAAATTTTGTTGAAAGGACATCTCCAGAATTTTCTCAAGTGGTTGTAAATAAAAAAACTCCATCTATAGCTCTTAATGAAC

Ace file of the UniGene sp_v3.0_unigene208368

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	2.0e-13	83%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%

Source	GOs	Term	Type	e value	Identity
Sma3	single-stranded DNA binding	GO:0003697	Molecular Function	0.0	-
Sma3	DNA replication	GO:0006260	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Primosome PriB/single-strand DNA-binding	IPR000424	-	-
Sma3	Single-strand DNA-binding	IPR011344	-	-
Sma3	Nucleic acid-binding, OB-fold	IPR012340	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NRA8

Fln msg: Distance to subject end: 120 aas, your sequence is shorter than subject: 48 - 390

Fln protein: ALQTLAGENDQPKIYKVIARTLNFVERTSPEFSQVVVNKKTPSIALNE

Protein Length: 49

Fln nts: TTGCTTTACAAACACTAGCTGGTGAAAATGATCAGCCAAAGATATACAAGGTTATTGCCAGAACACTAAATTTTGTTGAAAGGACATCTCCAGAATTTTCTCAAGTGGTTGTAAATAAAAAAACTCCATCTATAGCTCTTAATGAAC

Fln Alignment:

biogeco2_euler_13552___ALQTLAGENDQPKIYKVIARTLNFVERTSPEFS-QVVVNKKTPSIALNE
A9NRA8________________ALQTTAGENDQPKTYKVIAKTLNFVERTSPEFSQQVVVNKNNPSLALYE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain