SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene208122

Length: 152 nt

UniGene Fasta

>sp_v3.0_unigene208122
TTTCCAAGCATGATATTGTTCCTCGAATGTTCCTTGCACCATTTGACTCAATCGCTGAACCCTTGATTGCTATCTTGCCTTACTGGCAAGACATAATGGTTCATGGCAGTAAAGCTGTACTTCATTCTTCTATTCAAGATGCTTGTAAGACT

Ace file of the UniGene sp_v3.0_unigene208122

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	4.0e-14	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	76%

Source	GOs	Term	Type	e value	Identity
Sma3	triglyceride lipase activity	GO:0004806	Molecular Function	0.0	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipase, class 3	IPR002921	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LPZ4

Fln msg: Distance to subject end: 384 aas, your sequence is shorter than subject: 50 - 627

Fln protein: SKHDIVPRMFLAPFDSIAEPLIAILPYWQDIMVHGSKAVLHSSIQDACKT

Protein Length: 51

Fln nts: TTTCCAAGCATGATATTGTTCCTCGAATGTTCCTTGCACCATTTGACTCAATCGCTGAACCCTTGATTGCTATCTTGCCTTACTGGCAAGACATAATGGTTCATGGCAGTAAAGCTGTACTTCATTCTTCTATTCAAGATGCTTGTAAGACT

Fln Alignment:

biogeco1_euler_5155___SKHDIVPRMFLAPFDSIAEPLIAILPYWQDIMVHGSKAVLHSSIQDACKT
B8LPZ4________________SKHDIVPRMLLAPFESIAEPLIAVLPYWQGVMDNDSKNVSNSYIQDACKT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain