SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene206830

Length: 344 nt

UniGene Fasta

>sp_v3.0_unigene206830
AATCGAACTCCAGATCAAGCATATCAGGCTCCAGGGTTTTTAAGTAAGCTGATGATAGGAAGTTGTAGGAAATTTGGTGTTCAGATTTATATTACTGAAACTGTGTCTCCGTGTATATATAGCTGTTTTTATAAATATATGGTACAGCTGGTAATCCAGGAGTATTGGTGTTATAGATTATAAAGCATATCGAGCTTGTGAGATCAGAGAAGGATGAAGTCAGCTGGAGCCCTGGTTTGCATTTTGGTGGTGATTGTGGATGTGGTGGCTGGAATTTTGGGCATACAGGGTGAAATAGCACAGAATGAGGTCAGAGGCTATAGATATCTGGTATTTGAGTGCAG

Ace file of the UniGene sp_v3.0_unigene206830

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Annotations

Source	Descriptions	Term	Type	e value	Identity
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF1218	IPR009606	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NQY8

Fln msg: Distance to subject end: 57 aas, your sequence is shorter than subject: 43 - 101

Fln protein: MKSAGALVCILVVIVDVVAGILGIQGEIAQNEVRGYRYLVFEC

Protein Length: 44

Fln nts: AATCGAACTCCAGATCAAGCATATCAGGCTCCAGGGTTTTTAAGTAAGCTGATGATAGGAAGTTGTAGGAAATTTGGTGTTCAGATTTATATTACTGAAACTGTGTCTCCGTGTATATATAGCTGTTTTTATAAATATATGGTACAGCTGGTAATCCAGGAGTATTGGTGTTATAGATTATAAAGCATATCGAGCTTGTGAGATCAGAGAAGG_-_ATGAAGTCAGCTGGAGCCCTGGTTTGCATTTTGGTGGTGATTGTGGATGTGGTGGCTGGAATTTTGGGCATACAGGGTGAAATAGCACAGAATGAGGTCAGAGGCTATAGATATCTGGTATTTGAGTGCAG

Fln Alignment:

AllPine_b_rep_c67951___MKSAGXXXXXXXXXXXXXXXXXXXQGEIAQNEVRGYRYLVFEC
A9NQY8________________MRSAGALVCIFVVVLDVVAGILGIQGEIAQNEVRGFRYLVFEC

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain