SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene205702

Length: 190 nt

UniGene Fasta

>sp_v3.0_unigene205702
TTCAGGTTATCCAGAGGACGATGAGGATGAATCACAAAAGGCAGGAGCAGAAAAGTTGCCACCACCACCTGCTGTTGGTGATGGAGGTGCAAGTTGGCGATTAAAAGCTTTGAAGCGAGCACAAGAACAGGCAGCTCGAGAAGGTCGGAAGCTTGATGAGGTAGTTGAAGAACGATGGGATTCACTGGCG

Ace file of the UniGene sp_v3.0_unigene205702

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SK72_RICCO	-	-	2.0e-18	74%
FL-Next	tr=Nucleic acid binding protein, putative; Ricinus communis (Castor bean).	-	-	0.0	74%

Source	Gene names
Sma3	At1g56290; F14G9.10; GSVIVT00020152001; LOC_Os03g52980; OJ1365_D05.22; OSJNBa0057G07.3; OSTLU_94779; Os03g0740700; OsI_13448; OsJ_12509; PHYPADRAFT_135148; RCOM_1028070;

Source	InterPros	Term	Type	e value	Identity
Sma3	Cwf19-like protein, C-terminal domain-2	IPR006767	-	0.0	-
Sma3	Cwf19-like, C-terminal domain-1	IPR006768	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G56290.1	CwfJ-like family protein chr1:21075939-21078608 FORWARD LENGTH=692	2.0e-17	61%
RefSeq	Arabidopsis thaliana	NP_564716.1	CwfJ-like protein [Arabidopsis thaliana]	2.0e-17	61%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9SK72

Fln msg: Distance to subject end: 505 aas, your sequence is shorter than subject: 63 - 726

Fln protein: SGYPEDDEDESQKAGAEKLPPPPAVGDGGASWRLKALKRAQEQAAREGRKLDEVVEERWDSLA

Protein Length: 64

Fln nts: TTCAGGTTATCCAGAGGACGATGAGGATGAATCACAAAAGGCAGGAGCAGAAAAGTTGCCACCACCACCTGCTGTTGGTGATGGAGGTGCAAGTTGGCGATTAAAAGCTTTGAAGCGAGCACAAGAACAGGCAGCTCGAGAAGGTCGGAAGCTTGATGAGGTAGTTGAAGAACGATGGGATTCACTGGCG

Fln Alignment:

AllPine_b_rep_c60651___SGYPEDDEDESQKAGAEKLPPPPAVGDGGASWRLKALKRAQEQAAREGRKLDEVVEERWDSL
B9SK72________________SGYPDDAEE--QRGGGHQLPSSSVVGDGGASWRLKALKRAQEQAAREGRKLEQVVEERWDSL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain