SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene204516

Length: 474 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene204516 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	60S ribosomal protein L14 n=8 Tax=Glires RepID=RL14_MOUSE	-	-	4.0e-23	41%
FL-Next	sp=60S ribosomal protein L14-1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	47%
Sma3	60S ribosomal protein L14, putative	-	-	2.304e-09	-

Source	Gene names
Sma3	AT4G27090; At2g20450; At4g27090; BiGP; OJ1234_B11.29; OSIGBa0140J09.10; OSJNBb0070J16.13; OSJNBb0072M01.9; OSJNOa283G08.1; Os02g0622300; Os04g0515300; OsI_08121; OsI_16636; OsJ_15457; OsRPL14; PHATR_25577; PHYPADRAFT_185490; PHYPADRAFT_198630; POPTRDRAFT_

Source	GOs	Term	Type	Identity
Sma3	nucleolus	GO:0005730	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	endoplasmic reticulum	GO:0005783	Cellular Component	-
Sma3	ribosome	GO:0005840	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	cytosolic large ribosomal subunit	GO:0022625	Cellular Component	-
Sma3	structural constituent of ribosome	GO:0003735	Molecular Function	-
Sma3	translation	GO:0006412	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein L14	IPR002784	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G20450.1	Ribosomal protein L14 chr2:8813923-8815071 FORWARD LENGTH=134	3.0e-23	47%
RefSeq	Arabidopsis thaliana	NP_179635.1	60S ribosomal protein L14-1 [Arabidopsis thaliana]	4.0e-23	47%
RefSeq	Populus trichocarpa	XP_002300768.1	predicted protein [Populus trichocarpa]	2.0e-22	46%

Full-Lengther Next Prediction

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain