UniGene Name: sp_v3.0_unigene203281
Length: 232 nt
UniGene Fasta |
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>sp_v3.0_unigene203281
C |
Ace file of the UniGene sp_v3.0_unigene203281 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | R2R3-MYB transcription factor MYB14 n=1 Tax=Pinus taeda RepID=Q27IP2_PINTA | - | - | 7.0e-36 | 92% |
FL-Next | tr=R2R3-MYB transcription factor MYB14; Pinus taeda (Loblolly pine). | - | - | 0.0 | 92% |
Sma3 | MYB transcription factor | - | - | 3.744e-10 | - |
Source | Gene names |
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Sma3 | ATR1; At1g22640; At1g35515; At1g74080; At2g16720; At4g09460; At4g21440; At4g34990; At4g38620; At5g16770; At5g49330; At5g60890; B1053A04.9; DcMYB3-1; DcMYB3-2; F12K8.1; F20M13.180; F2P9.5; F5E19_110; FcMYB251; GSVIVT00006679001; GSVIVT00013992001; GSVIVT00 |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | nucleus | GO:0005634 | Cellular Component | 0.0 | - |
Sma3 | DNA binding | GO:0003677 | Molecular Function | 0.0 | - |
Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
Sma3 | cysteine-type peptidase activity | GO:0008234 | Molecular Function | 0.0 | - |
Sma3 | transcription activator activity | GO:0016563 | Molecular Function | 0.0 | - |
Sma3 | tryptophan biosynthetic process | GO:0000162 | Biological Process | 0.0 | - |
Sma3 | defense response to insect | GO:0002213 | Biological Process | 0.0 | - |
Sma3 | regulation of transcription, DNA-dependent | GO:0006355 | Biological Process | 0.0 | - |
Sma3 | proteolysis | GO:0006508 | Biological Process | 0.0 | - |
Sma3 | response to stress | GO:0006950 | Biological Process | 0.0 | - |
Sma3 | response to wounding | GO:0009611 | Biological Process | 0.0 | - |
Sma3 | cold acclimation | GO:0009631 | Biological Process | 0.0 | - |
Sma3 | response to salt stress | GO:0009651 | Biological Process | 0.0 | - |
Sma3 | response to ethylene stimulus | GO:0009723 | Biological Process | 0.0 | - |
Sma3 | response to auxin stimulus | GO:0009733 | Biological Process | 0.0 | - |
Sma3 | response to abscisic acid stimulus | GO:0009737 | Biological Process | 0.0 | - |
Sma3 | response to gibberellin stimulus | GO:0009739 | Biological Process | 0.0 | - |
Sma3 | response to salicylic acid stimulus | GO:0009751 | Biological Process | 0.0 | - |
Sma3 | response to jasmonic acid stimulus | GO:0009753 | Biological Process | 0.0 | - |
Sma3 | indole glucosinolate biosynthetic process | GO:0009759 | Biological Process | 0.0 | - |
Sma3 | cinnamic acid biosynthetic process | GO:0009800 | Biological Process | 0.0 | - |
Sma3 | negative regulation of metabolic process | GO:0009892 | Biological Process | 0.0 | - |
Sma3 | cellular response to sulfur starvation | GO:0010438 | Biological Process | 0.0 | - |
Sma3 | GO:0045449 | Biological Process | 0.0 | - | |
Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Ketose-bisphosphate aldolase, class-II | IPR000771 | - | 0.0 | - |
Sma3 | SANT/Myb domain | IPR001005 | - | 0.0 | - |
Sma3 | Peptidase C48, SUMO/Sentrin/Ubl1 | IPR003653 | - | 0.0 | - |
Sma3 | Transposon, En/Spm-like | IPR004242 | - | 0.0 | - |
Sma3 | Myb-related protein P, C-terminal | IPR010588 | - | 0.0 | - |
Sma3 | IPR012287 | - | 0.0 | - | |
Sma3 | IPR014778 | - | 0.0 | - | |
Sma3 | Myb transcription factor | IPR015495 | - | 0.0 | - |
Sma3 | Myb-like domain | IPR017877 | - | 0.0 | - |
Sma3 | Myb domain, DNA-binding | IPR017930 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT4G38620.1 | ATMYB4, MYB4 myb domain protein 4 chr4:18053866-18054876 FORWARD LENGTH=282 | 1.4013e-45 | 90% |
RefSeq | Arabidopsis thaliana | NP_195574.1 | transcription repressor MYB4 [Arabidopsis thaliana] | 1.4013e-45 | 90% |
RefSeq | Populus trichocarpa | XP_002306180.1 | predicted protein [Populus trichocarpa] | 7.00649e-45 | 88% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: Q27IP2
Fln msg: Distance to subject end: 140 aas, your sequence is shorter than subject: 76 - 233
Fln protein:
W
Protein Length:
77
Fln nts:
C
Fln Alignment:
AllPine_b_c56330___WTQQEDARLVAYIQAHGEGGWRYLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLI
Q27IP2________________WTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSEQEDELIIKFHSRLGNKWSLI
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain