SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene202817

Length: 636 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene202817 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	V-type proton ATPase subunit F n=1 Tax=Corchorus olitorius RepID=A7LIT9_9ROSI	-	-	2.0e-25	84%
FL-Next	sp=V-type proton ATPase subunit F; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	77%
Sma3	Vacuolar proton pump subunit F	-	-	2.643e-09	-

Source	Gene names
Sma3	At4g02620; OJ1063_D06.15; Os02g0824700; Os04g0137500; OsI_09518; OsI_14722; OsJ_08944; OsJ_13663; PHYPADRAFT_203227; PHYPADRAFT_208972; POPTRDRAFT_818691; RCOM_1381970; T10P11.25; VATF; VHA-F; VITISV_029487;

Source	GOs	Term	Type	Identity
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	proton-transporting V-type ATPase, V1 domain	GO:0033180	Cellular Component	-
Sma3	hydrogen ion transporting ATP synthase activity, rotational mechanism	GO:0046933	Molecular Function	-
Sma3	proton-transporting ATPase activity, rotational mechanism	GO:0046961	Molecular Function	-
Sma3	ATP synthesis coupled proton transport	GO:0015986	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	ATPase, V1 complex, subunit F, eukaryotic	IPR005772	-	0.0	-
Sma3	ATPase, V1/A1 complex, subunit F	IPR008218	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G02620.1	vacuolar ATPase subunit F family protein chr4:1149419-1151132 REVERSE LENGTH=128	2.0e-26	77%
RefSeq	Arabidopsis thaliana	NP_192171.1	V-type proton ATPase subunit F [Arabidopsis thaliana]	3.0e-26	77%
RefSeq	Populus trichocarpa	XP_002306813.1	predicted protein [Populus trichocarpa]	3.0e-26	86%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain