SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene200056

Length: 235 nt

UniGene Fasta

>sp_v3.0_unigene200056
AAACTTTGTAGATATACTGGAAAAGATAGATCCCGTTATGATATTTCAGATCAAGATATAGTGTTGACAACTTATGATACTTTTCGAAGGGATTATAATTCTCTTGTGAGGACCGATTGGATTTGTGCAGTATTTGATGAAGTACATAAAATCAAAGACCGAAAGTCTCAAATTGCAAAATGTGCAATGTCAATTCCTACACAACGTAGATATGGCTTAACGGGGACTGTTATGC

Ace file of the UniGene sp_v3.0_unigene200056

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	SNF2 super family (Fragment) n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MN06_MICPC	-	-	9.0e-10	44%
FL-Next	sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	40%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9FIY7

Fln msg: Distance to subject end: 423 aas, your sequence is shorter than subject: 78 - 1277

Fln protein: KLCRYTGKDRSRYDISDQDIVLTTYDTFRRDYNSLVRTDWICAVFDEVHKIKDRKSQIAKCAMSIPTQRRYGLTGTVM

Protein Length: 79

Fln nts: AAACTTTGTAGATATACTGGAAAAGATAGATCCCGTTATGATATTTCAGATCAAGATATAGTGTTGACAACTTATGATACTTTTCGAAGGGATTATAATTCTCTTGTGAGGACCGATTGGATTTGTGCAGTATTTGATGAAGTACATAAAATCAAAGACCGAAAGTCTCAAATTGCAAAATGTGCAATGTCAATTCCTACACAACGTAGATATGGCTTAACGGGGACTGTTATGC

Fln Alignment:

AllPine_b_c42685___YTGKDRSR--YDISDQDIVLTTYDTFRRDY-----NSLV-RTDWICAVFDEVHKIKDRKSQIAKCAMSIPTQRRYGLTGT
Q9FIY7________________YYGGDRTHDAKAIASHDVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain