SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene199456

Length: 155 nt

UniGene Fasta

>sp_v3.0_unigene199456
TGCAGATGGCCGTTTCCATGAAAAGGAGAATTTGAAGCGCTGTGTAAGGGATGCTTTGAGCAGGAAGCAACTGTTGGCATTTATTGTCTTGGATAGTCCAGAGGAATCAATAATGGATGTGCAATCTGATCATTCACTGATGGAATGCCTAAGTT

Ace file of the UniGene sp_v3.0_unigene199456

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PREDICTED: similar to midasin-related n=1 Tax=Vitis vinifera RepID=UPI00019863A5	-	-	5.0e-11	78%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	73%

Source	Gene names
Sma3	GSVIVT00034118001; PHYPADRAFT_231560; POPTRDRAFT_782171; RCOM_0654710;

Source	InterPros	Term	Type	Identity
Sma3	Peptidase M14, carboxypeptidase A	IPR000834	-	-
Sma3	Beta-lactamase, class-A/D	IPR000871	-	-
Sma3	von Willebrand factor, type A	IPR002035	-	-
Sma3	RNA polymerase sigma factor 54, interaction	IPR002078	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	ATPase, AAA-3	IPR011703	-	-
Sma3	ATPase, dynein-related, AAA domain	IPR011704	-	-
Sma3	Midasin	IPR012099	-	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002327931.1	predicted protein [Populus trichocarpa]	2.0e-15	82%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9SXU6

Fln msg: Distance to subject end: 41 aas, your sequence is shorter than subject: 51 - 241

Fln protein: ADGRFHEKENLKRCVRDALSRKQLLAFIVLDSPEESIMDVQSDHSLMECLS

Protein Length: 52

Fln nts: TGCAGATGGCCGTTTCCATGAAAAGGAGAATTTGAAGCGCTGTGTAAGGGATGCTTTGAGCAGGAAGCAACTGTTGGCATTTATTGTCTTGGATAGTCCAGAGGAATCAATAATGGATGTGCAATCTGATCATTCACTGATGGAATGCCTAAGTT

Fln Alignment:

AllPine_b_c41921___ADGRFHEKENLKRCVRDALSRKQLLAFIVLDSPEESIMDVQS
A9SXU6________________ADGRFHEKESLKRRIREAMDRKQLLAFLVLDNPRESILDMQS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain