SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene198041

Length: 138 nt

UniGene Fasta

>sp_v3.0_unigene198041
CTTCTGCTGCGCACAAAGGAGTGTGGGACTGCAGGAAAGTTACTACGCAACGTCGTGCCCGAGAGCAGAGGAAGTAGTGAAGGAGCAGGTCTACAATCTCTACCAGGAGCACGGCAACACTGCCGTTTCATGGATCAG

Ace file of the UniGene sp_v3.0_unigene198041

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative peroxidase [Oryza sativa Japonica Group] tpe\|CAH69358.1\| TPA: class III peroxidase 116 precursor [Oryza sativa Japonica Group]	-	-	1.0e-06	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	56%

Source	Gene names
Sma3	PO2; POPTRDRAFT_589413;

Source	InterPros	Term	Type	e value	Identity
Sma3	Plant peroxidase	IPR000823	-	0.0	-
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002326343.1	predicted protein [Populus trichocarpa]	3.0e-13	72%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NNP1

Fln msg: Distance to subject end: 268 aas, your sequence is shorter than subject: 45 - 342

Fln protein: FCCAQRSVGLQESYYATSCPRAEEVVKEQVYNLYQEHGNTAVSWI

Protein Length: 46

Fln nts: CTTCTGCTGCGCACAAAGGAGTGTGGGACTGCAGGAAAGTTACTACGCAACGTCGTGCCCGAGAGCAGAGGAAGTAGTGAAGGAGCAGGTCTACAATCTCTACCAGGAGCACGGCAACACTGCCGTTTCATGGATCAG

Fln Alignment:

AllPine_b_c39608___GLQESYYATSCPRAEEVVKEQVYNLYQEHGNTAVSWI
A9NNP1________________GLVMNYYGDSCPQAEEIIAEQVRLLYKRHKNTAFSWL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain