UniGene Name: sp_v3.0_unigene197012
Length: 218 nt
UniGene Fasta |
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>sp_v3.0_unigene197012
A |
Ace file of the UniGene sp_v3.0_unigene197012 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | Putative receptor protein kinase n=1 Tax=Oryza sativa Japonica Group RepID=Q8S3P8_ORYSJ | - | - | 7.0e-26 | 74% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 83% |
Sma3 | Putative Receptor-like serine/threonine kinase(RFK1) | - | - | 1.084e-12 | - |
Source | ECs | Term | Type | e value | Identity |
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Sma3 | Non-specific protein-tyrosine kinase. | EC:2.7.10.2 | - | 6.659e-12 | - |
Source | Gene names |
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Sma3 | 24K23.9; AT1G53420; AT3G14840; At1g70520; At1g70530; At4g34440; At4g34440/T4L20_20; B1130G10.10; CRK2; CRK3; F14G9.24; F24J13.10; F24J13.9; F5A18.8; GSVIVT00002759001; GSVIVT00002761001; GSVIVT00002762001; GSVIVT00010709001; GSVIVT00013445001; GSVIVT00016 |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
Sma3 | nucleic acid binding | GO:0003676 | Molecular Function | 0.0 | - |
Sma3 | RNA binding | GO:0003723 | Molecular Function | 0.0 | - |
Sma3 | RNA-directed DNA polymerase activity | GO:0003964 | Molecular Function | 0.0 | - |
Sma3 | aspartic-type endopeptidase activity | GO:0004190 | Molecular Function | 0.0 | - |
Sma3 | protein serine/threonine kinase activity | GO:0004674 | Molecular Function | 0.0 | - |
Sma3 | protein tyrosine kinase activity | GO:0004713 | Molecular Function | 0.0 | - |
Sma3 | receptor activity | GO:0004872 | Molecular Function | 0.0 | - |
Sma3 | structural constituent of cell wall | GO:0005199 | Molecular Function | 0.0 | - |
Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
Sma3 | sugar binding | GO:0005529 | Molecular Function | 0.0 | - |
Sma3 | zinc ion binding | GO:0008270 | Molecular Function | 0.0 | - |
Sma3 | RNA-dependent DNA replication | GO:0006278 | Biological Process | 0.0 | - |
Sma3 | protein phosphorylation | GO:0006468 | Biological Process | 0.0 | - |
Sma3 | proteolysis | GO:0006508 | Biological Process | 0.0 | - |
Sma3 | recognition of pollen | GO:0048544 | Biological Process | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT1G70530.1 | CRK3 cysteine-rich RLK (RECEPTOR-like protein kinase) 3 chr1:26588750-26591379 REVERSE LENGTH=646 | 2.0e-29 | 67% |
RefSeq | Arabidopsis thaliana | NP_177210.1 | cysteine-rich receptor-like protein kinase 3 [Arabidopsis thaliana] | 3.0e-29 | 67% |
RefSeq | Populus trichocarpa | XP_002298473.1 | predicted protein, partial [Populus trichocarpa] | 2.0e-32 | 70% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: B8LLL8
Fln msg: Distance to subject end: 149 aas, your sequence is shorter than subject: 72 - 245
Fln protein:
D
Protein Length:
73
Fln nts:
A
Fln Alignment:
AllPine_b_c37820___IIVGTARGLSYLHEDSNMRIIHRDIKCANILLDGSFHPKIGDFGMARFFPEDQTHVSTRFGGTMGYTAPEY
B8LLL8________________IIVGTARGLTYLHEDSNVRIIHRDIKCGNILLDDRFHPKIADFGLARFFPDGETHVSTRVGGTIGYTAPEY
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain