SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene196276

Length: 153 nt

UniGene Fasta

>sp_v3.0_unigene196276
TTCGTCAACTTTCAATGCTGGAAAGGCAACTAGCTCAAGGCACGGATAAAGGAGGCAGAAATAGTAGAAGAGAGTATTCAACACGCAAAGGAAGCAGTTATGTTAGATGTGAAGGATGGCCAGTCTTGGTATGCTTTGGGGAATGCATATTTA

Ace file of the UniGene sp_v3.0_unigene196276

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	74%

Source	Gene names
Sma3	GSVIVT00030445001; Os01g0506200; OsI_02115; OsJ_01948; P0436D06.46; PHYPADRAFT_140074;

Source	GOs	Term	Type	e value	Identity
Sma3	binding	GO:0005488	Molecular Function	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Tetratricopeptide TPR-1	IPR001440	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	Tetratricopeptide repeat-containing domain	IPR013026	-	-
Sma3	Tetratricopeptide repeat	IPR019734	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9T429

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 234 aas, your sequence is shorter than subject: 51 - 414

Fln protein: FVNFQCWKGN*LKARIKEAEIVEESIQHAKEAVMLDVKDGQSWYALGNAYL

Protein Length: 52

Fln nts: TTCGTCAACTTTCAATGCTGGAAAGGCAACTAGCTCAAGGCACGGATAAAGGAGGCAGAAATAGTAGAAGAGAGTATTCAACACGCAAAGGAAGCAGTTATGTTAGATGTGAAGGATGGCCAGTCTTGGTATGCTTTGGGGAATGCATATTTA

Fln Alignment:

AllPine_b_c36452___KARIKEAEIVEESIQHAKEAVMLDVKDGQSWYALGNAYL
A9T429________________KGSADEAETVEESILHAKQAVSLDIKDGQSWYTLGNAYL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain