UniGene Name: sp_v3.0_unigene195944
Length: 209 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
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>sp_v3.0_unigene195944
C |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | ATP-binding cassette transporter n=1 Tax=Selaginella moellendorffii RepID=D8T797_SELML | - | - | 4.0e-19 | 72% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 62% |
Sma3 | ATP-binding cassette transporter, putative | - | - | 0.0 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Phosphonate-transporting ATPase. | EC:3.6.3.28 | - | 2.8026e-45 | - |
Sma3 | Heme-transporting ATPase. | EC:3.6.3.41 | - | 3.018e-11 | - |
Source | Gene names |
---|---|
Sma3 | ABC1; At1g15210; At1g15520; At1g59870; At1g66950; At2g29940; At2g36380; At2g37280; At3g16340; At3g53480; B1045F02.15; B1090H08.39; F1O11.1; F1O19.3; F23F1.14; F23H11.19; F3G5.7; F4P12.180; F9L1.15; GSVIVT00012733001; GSVIVT00016813001; GSVIVT00016819001; |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | mitochondrion | GO:0005739 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
Sma3 | chloroplast envelope | GO:0009941 | Cellular Component | 0.0 | - |
Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
Sma3 | DNA binding | GO:0003677 | Molecular Function | 0.0 | - |
Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
Sma3 | cadmium ion transmembrane transporter activity | GO:0015086 | Molecular Function | 0.0 | - |
Sma3 | ATPase activity | GO:0016887 | Molecular Function | 0.0 | - |
Sma3 | protein dimerization activity | GO:0046983 | Molecular Function | 0.0 | - |
Sma3 | transport | GO:0006810 | Biological Process | 0.0 | - |
Sma3 | defense response | GO:0006952 | Biological Process | 0.0 | - |
Sma3 | response to biotic stimulus | GO:0009607 | Biological Process | 0.0 | - |
Sma3 | systemic acquired resistance | GO:0009627 | Biological Process | 0.0 | - |
Sma3 | response to ethylene stimulus | GO:0009723 | Biological Process | 0.0 | - |
Sma3 | response to salicylic acid stimulus | GO:0009751 | Biological Process | 0.0 | - |
Sma3 | response to jasmonic acid stimulus | GO:0009753 | Biological Process | 0.0 | - |
Sma3 | defense response to fungus, incompatible interaction | GO:0009817 | Biological Process | 0.0 | - |
Sma3 | response to ozone | GO:0010193 | Biological Process | 0.0 | - |
Sma3 | cadmium ion transport | GO:0015691 | Biological Process | 0.0 | - |
Sma3 | lead ion transport | GO:0015692 | Biological Process | 0.0 | - |
Sma3 | negative regulation of defense response | GO:0031348 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Ribosomal protein L11 | IPR000911 | - | 0.0 | - |
Sma3 | Legume lectin domain | IPR001220 | - | 0.0 | - |
Sma3 | Proteinase inhibitor I2, Kunitz metazoa | IPR002223 | - | 0.0 | - |
Sma3 | ABC transporter-like | IPR003439 | - | 0.0 | - |
Sma3 | AAA+ ATPase domain | IPR003593 | - | 0.0 | - |
Sma3 | Zinc finger, BED-type predicted | IPR003656 | - | 0.0 | - |
Sma3 | ATPase, AAA-type, core | IPR003959 | - | 0.0 | - |
Sma3 | Pleiotropic drug resistance protein PDR | IPR005285 | - | 0.0 | - |
Sma3 | HAT dimerisation | IPR008906 | - | 0.0 | - |
Sma3 | ABC-2 type transporter | IPR013525 | - | 0.0 | - |
Sma3 | Plant PDR ABC transporter associated | IPR013581 | - | 0.0 | - |
Sma3 | ABC transporter, conserved site | IPR017871 | - | 0.0 | - |
Sma3 | Peptidase S26A, signal peptidase I, serine active site | IPR019756 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT3G53480.1 | PIS1, PDR9, ATPDR9, ABCG37 pleiotropic drug resistance 9 chr3:19825366-19831644 FORWARD LENGTH=1450 | 9.0e-22 | 71% |
RefSeq | Arabidopsis thaliana | NP_190916.1 | ABC transporter G family member 37 [Arabidopsis thaliana] | 1.0e-21 | 71% |
RefSeq | Populus trichocarpa | XP_002304713.1 | pleiotropic drug resistance protein [Populus trichocarpa] | 2.0e-21 | 66% |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: B8LN70
Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 176 aas, your sequence is shorter than subject: 69 - 443
Fln protein:
W
Protein Length:
70
Fln nts:
C
Fln Alignment:
AllPine_b_c35867___TLY*RGHVSYNGFQLNEFVAQKTSAYISQHDLHIAEMTVRETFDFAVRCQGVGTRHDLL
B8LN70________________TLKVEGEVKYNGHALNEFVPERTSTYISQHDTHMGELTVRETLNFSARCQGVGSRYDVL
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain