SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene194160

Length: 161 nt

UniGene Fasta

>sp_v3.0_unigene194160
CATCAGGAATACAGACAACAAGCCCTTTACTTTCTCTTTTGCTTATCACACTTACTTTTGTGTCTCTGATATCAGTGAAGTGCGGATAGAGGGGTTGGAAACATTGGATTATCTAGACTTGTTACAGGATAAAGAACGCTTTACTGAACAAAGTGATGCTA

Ace file of the UniGene sp_v3.0_unigene194160

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Apospory-associated protein C n=2 Tax=Arabidopsis RepID=Q9LVC5_ARATH	-	-	2.0e-17	82%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Sma3	Aldose 1-epimerase, putative	-	-	9.887e-22	-

Source	Gene names
Sma3	24K23.3; 8F2.10; AT4g23730; At3g01590; At3g61610; At4g23730; At5g14500; At5g57330; F18O22_290; F2A19.210; F4P13.13; F9D16.200; GSVIVT00002471001; GSVIVT00020653001; GSVIVT00026976001; GSVIVT00031339001; MtrDRAFT_AC155282g40v2; OJ1781_H11.26; OSIGBa0118P15

Source	GOs	Term	Type	Identity
Sma3	isomerase activity	GO:0016853	Molecular Function	-
Sma3	carbohydrate binding	GO:0030246	Molecular Function	-
Sma3	carbohydrate metabolic process	GO:0005975	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Aldose 1-/Glucose-6-phosphate 1-epimerase	IPR008183	-	0.0	-
Sma3	Glycoside hydrolase-type carbohydrate-binding, subgroup	IPR014718	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G57330.1	Galactose mutarotase-like superfamily protein chr5:23218392-23220664 FORWARD LENGTH=312	4.0e-24	82%
RefSeq	Arabidopsis thaliana	NP_200543.1	glucose-6-phosphate 1-epimerase [Arabidopsis thaliana]	5.0e-24	82%
RefSeq	Populus trichocarpa	XP_002324462.1	predicted protein [Populus trichocarpa]	9.0e-24	82%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NT43

Fln msg: Distance to subject end: 109 aas, your sequence is shorter than subject: 53 - 243

Fln protein: IRNTDNKPFTFSFAYHTYFCVSDISEVRIEGLETLDYLDLLQDKERFTEQSDA

Protein Length: 54

Fln nts: CATCAGGAATACAGACAACAAGCCCTTTACTTTCTCTTTTGCTTATCACACTTACTTTTGTGTCTCTGATATCAGTGAAGTGCGGATAGAGGGGTTGGAAACATTGGATTATCTAGACTTGTTACAGGATAAAGAACGCTTTACTGAACAAAGTGATGCTA

Fln Alignment:

AllPine_b_c32789___IRNTDNKPFTFSFAYHTYFCVSDISEVRIEGLETLDYLDLLQDKERFTEQSDA
A9NT43________________IRNTDSKPFTFTFAYHTYFSVSDISEVPVEGLETLDYLDNLQNKERFTEQGDA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain