SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene192916

Length: 420 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v3.0_unigene192916
TCTACTTGTCGAAGCTCAACAACTGCGTTGTCACTGTCACCGGTAAAGTTACCGCTGTCGCTGCCGACGGATGCACTGCCACCGGTATTGTCATCAACGACGATGTTGTGTGCAGCTTCGAAGCCACCAACTGCAAGAAGCTTCAAGTCCAAACCAACGGTGCGATCCCTGTCTTCCAAATCGAGAAGACTCAAGGTGCTACCGTGTTCCTCCAGTCCGTAGCCTCTCGCTCTGCCTCCATCGTCACCTCTCTTTCCACTGAGCTCAACGTTGTTGTTCCTGGTGCCAGTGATGAGGATGACCCCATCGAATTAGCCGTCCCTGAGCAATATGCTTCCACTTACGCCAACGGTAAACTTACCACCGTCCCTACTTCCCATGTTTAAATACCAATAAAGCCTCCTGCGTTTTATCAAAAAA

Ace file of the UniGene sp_v3.0_unigene192916 (antisense)

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Adenylyl cyclase-associated protein n=1 Tax=Dictyostelium discoideum RepID=CAP_DICDI	-	-	2.0e-17	42%
FL-Next	sp=Adenylyl cyclase-associated protein; Coccomyxa subellipsoidea C-169.	-	-	0.0	40%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: I0Z4B8

Fln msg: your sequence is shorter than subject: 128 - 376

Fln protein: YLSKLNNCVVTVTGKVTAVAADGCTATGIVINDDVVCSFEATNCKKLQVQTNGAIPVFQIEKTQGATVFLQSVASRSASIVTSLSTELNVVVPGASDEDDPIELAVPEQYASTYANGKLTTVPTSHV*

Protein Length: 129

Fln nts: TCTACTTGTCGAAGCTCAACAACTGCGTTGTCACTGTCACCGGTAAAGTTACCGCTGTCGCTGCCGACGGATGCACTGCCACCGGTATTGTCATCAACGACGATGTTGTGTGCAGCTTCGAAGCCACCAACTGCAAGAAGCTTCAAGTCCAAACCAACGGTGCGATCCCTGTCTTCCAAATCGAGAAGACTCAAGGTGCTACCGTGTTCCTCCAGTCCGTAGCCTCTCGCTCTGCCTCCATCGTCACCTCTCTTTCCACTGAGCTCAACGTTGTTGTTCCTGGTGCCAGTGATGAGGATGACCCCATCGAATTAGCCGTCCCTGAGCAATATGCTTCCACTTACGCCAACGGTAAACTTACCACCGTCCCTACTTCCCATGTTTAA___ATACCAATAAAGCCTCCTGCGTTTTATCAAAAAA

Fln Alignment:

AllPine_b_c31095___YLSKLNNCXXXXXXXXXXXXADGCTATGIVINDDVVCSFEATNCKKLQVQTNGAIPVFQIEKTQGATVFLQSVASRSASIVTSLSTELNVVVPGASDEDDPIELAVPEQYASTYANGKLTTVPTSH
I0Z4B8________________YIYKCSNSTIQVKGKVNAISVDSCQRVGLLF-EDIVAACELVNSTRIQAQATGVVPTIAVDKCDGVQLYL-SADSLGVDITTAKSSEVNVIVPGATPEADLVEHAIPEQYLSQYKNGKFVTAPVSH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain