SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene192187

Length: 578 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene192187 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Haliotis discus discus RepID=B6RB55_HALDI	-	-	1.0e-30	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	30%
Sma3	Peptidyl-prolyl cis-trans isomerase, FKBP-type	-	-	1.867e-13	-

Source	ECs	Term	Type	e value	Identity
Sma3	Peptidylprolyl isomerase.	EC:5.2.1.8	-	4.639e-19	-

Source	Gene names
Sma3	AT5G48570; At3g25230; At5g48570; CHLREDRAFT_106360; CHLREDRAFT_195500; CHLREDRAFT_34108; CHLREDRAFT_35439; CHLREDRAFT_77543; FBP65; FKB12; FKB15-1; FKB16-2a\|FKB16-2c\|FKB16-2b; FKB16-5; FKB53; FKBP70; FKBP77; GSVIVT00004554001; GSVIVT00011129001; MICPUCDRA

Source	GOs	Term	Type	Identity
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	peptidyl-prolyl cis-trans isomerase activity	GO:0003755	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	calmodulin binding	GO:0005516	Molecular Function	-
Sma3	isomerase activity	GO:0016853	Molecular Function	-
Sma3	protein folding	GO:0006457	Biological Process	-
Sma3	response to stress	GO:0006950	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain	IPR001179	-	-
Sma3	Tetratricopeptide TPR-1	IPR001440	-	-
Sma3	Glycoside hydrolase, chitinase active site	IPR001579	-	-
Sma3	Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain	IPR002130	-	-
Sma3	Twin-arginine translocation pathway, signal sequence	IPR006311	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	Tetratricopeptide repeat-containing domain	IPR013026	-	-
Sma3	Tetratricopeptide TPR2	IPR013105	-	-
Sma3		IPR017909	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	Tetratricopeptide repeat	IPR019734	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G48570.1	ROF2, ATFKBP65, FKBP65 FKBP-type peptidyl-prolyl cis-trans isomerase family protein chr5:19690746-19693656 REVERSE LENGTH=578	2.0e-32	53%
RefSeq	Arabidopsis thaliana	NP_199668.1	peptidylprolyl isomerase [Arabidopsis thaliana]	2.0e-32	53%
RefSeq	Populus trichocarpa	XP_002321107.1	predicted protein [Populus trichocarpa]	7.0e-36	58%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain