UniGene Name: sp_v3.0_unigene192070
Length: 240 nt
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>sp_v3.0_unigene192070
C |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Peptidyl-prolyl cis-trans isomerase B n=1 Tax=Dictyostelium discoideum RepID=PPIB_DICDI | - | - | 3.0e-16 | 85% |
FL-Next | sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 72% |
Sma3 | Peptidyl-prolyl cis-trans isomerase | - | - | 0.0 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Peptidylprolyl isomerase. | EC:5.2.1.8 | - | 0.0 | - |
Source | Gene names |
---|---|
Sma3 | 56B23-g9; At3g62030; At4g38740; At5g13120; At5g58710; CHLREDRAFT_34270; CYN20-1; CYP-B; CYP18-2; CYP18-3; CYP20-1; CYP20-2; CYP20-3; CYP23-a; CYP23-b; CYP23-c; CyP1; CyP2; CyP3; Cyp; Cyp1; Cyp2; F21F14.200; GSVIVT00006984001; GSVIVT00024100001; GSVIVT0002 |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | extracellular region | GO:0005576 | Cellular Component | 0.0 | - |
Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | endoplasmic reticulum | GO:0005783 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
Sma3 | chloroplast thylakoid membrane | GO:0009535 | Cellular Component | 0.0 | - |
Sma3 | chloroplast stroma | GO:0009570 | Cellular Component | 0.0 | - |
Sma3 | chloroplast envelope | GO:0009941 | Cellular Component | 0.0 | - |
Sma3 | cytosolic ribosome | GO:0022626 | Cellular Component | 0.0 | - |
Sma3 | thylakoid lumen | GO:0031977 | Cellular Component | 0.0 | - |
Sma3 | apoplast | GO:0048046 | Cellular Component | 0.0 | - |
Sma3 | peptidyl-prolyl cis-trans isomerase activity | GO:0003755 | Molecular Function | 0.0 | - |
Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
Sma3 | peptide binding | GO:0042277 | Molecular Function | 0.0 | - |
Sma3 | protein folding | GO:0006457 | Biological Process | 0.0 | - |
Sma3 | response to oxidative stress | GO:0006979 | Biological Process | 0.0 | - |
Sma3 | plant-type hypersensitive response | GO:0009626 | Biological Process | 0.0 | - |
Sma3 | response to light intensity | GO:0009642 | Biological Process | 0.0 | - |
Sma3 | response to salt stress | GO:0009651 | Biological Process | 0.0 | - |
Sma3 | response to mannitol stimulus | GO:0010555 | Biological Process | 0.0 | - |
Sma3 | cysteine biosynthetic process | GO:0019344 | Biological Process | 0.0 | - |
Sma3 | defense response to bacterium | GO:0042742 | Biological Process | 0.0 | - |
Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain | IPR002130 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT5G58710.1 | ROC7 rotamase CYP 7 chr5:23717840-23719495 FORWARD LENGTH=204 | 9.0e-17 | 75% |
RefSeq | Arabidopsis thaliana | NP_200679.1 | Peptidyl-prolyl cis-trans isomerase CYP20-1 [Arabidopsis thaliana] | 1.0e-16 | 75% |
RefSeq | Populus trichocarpa | XP_002313378.1 | predicted protein [Populus trichocarpa] | 4.0e-17 | 72% |
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Fln status: N-terminus
Fln database: coniferopsida.fasta
Fln subject: A9NK21
Fln msg: Distance to subject end: 129 aas, your sequence is shorter than subject: 78 - 204
Fln protein:
M
Protein Length:
79
Fln nts:
C
Fln Alignment:
AllPine_b_c30177___KITHKVFFDMEIDNKPVGRIVFGLYGGTVPRTVENFRALTTGEK
A9NK21________________EITHKVYFDVEIAGKPAGRVVIGLFGKTVPKTVENFRALCTGEK
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain