SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene189228

Length: 1030 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene189228

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative aminoacylase [Oryza sativa Japonica Group]	-	-	0.0	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	65%
Sma3	Aminoacylase-1	-	-	9.682e-13	-

Source	ECs	Term	Type	e value	Identity
Sma3	Aminoacylase.	EC:3.5.1.14	-	9.835e-09	-

Source	KEGGs	Term	e value	Identity
Sma3	Arginine and proline metabolism	00330	9.835e-09	%
Sma3	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064	9.835e-09	%
Sma3	Metabolic pathways	01100	9.835e-09	%
Sma3	Biosynthesis of secondary metabolites	01110	9.835e-09	%

Source	Gene names
Sma3	AT4G38220; AT4g38220; At1g44180; At1g44820; At4g38220; F20D10.340; GSVIVT00015362001; GSVIVT00036293001; Os06g0210200; Os08g0511900; OsI_22115; OsI_29850; OsJ_27905; P0021C04.7; P0711H09.5; PHYPADRAFT_207940; PHYPADRAFT_55063; POPTRDRAFT_643640; POPTRDRAF

Source	GOs	Term	Type	Identity
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	aminoacylase activity	GO:0004046	Molecular Function	-
Sma3	metallopeptidase activity	GO:0008237	Molecular Function	-
Sma3	protein dimerization activity	GO:0046983	Molecular Function	-
Sma3	proteolysis	GO:0006508	Biological Process	-
Sma3	cellular amino acid metabolic process	GO:0006520	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	ArgE/DapE/ACY1/CPG2/YscS, conserved site	IPR001261	-	-
Sma3	Peptidase M20	IPR002933	-	-
Sma3	N-acyl-L-amino-acid amidohydrolase	IPR010159	-	-
Sma3	Peptidase M20, dimerisation	IPR011650	-	-
Sma3		IPR017909	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G38220.2	Peptidase M20/M25/M40 family protein chr4:17925251-17926919 FORWARD LENGTH=433	65%
RefSeq	Arabidopsis thaliana	NP_568036.2	Peptidase M20/M25/M40 family protein [Arabidopsis thaliana]	66%
RefSeq	Populus trichocarpa	XP_002312793.1	predicted protein [Populus trichocarpa]	70%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5A9K6

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 234 - 446

Fln protein: FLTFIRFFASFLALQGRKGKGDGCPSSNEGRYWFSSVSSVLLVGIKIALLVGLFPFRIQRRAVFL*HYLLGFVMNLQPSEAEAGFDIRVSPGTNAESLERRIAEEWAPVSRNMTYEFKQKEPIQNKLGLPLVTVANDSNPWWTLLEVAILKAGGKLHKPEIFPAATDARYVRELGIPAFGFSPIANTPILLHDHNEFLNEAEYLKGIGVYEAIIESYASYVEASEDRESLSEL*

Protein Length: 235

Fln nts: TTTTTTGACATTCATTCGCTTCTTTGCTAGCTTCCTTGCATTACAAGGAAGGAAGGGAAAAGGCGATGGATGTCCCTCATCTAACGAAGGGAGGTATTGGTTTTCATCTGTCTCTAGCGTCTTGCTTGTGGGCATTAAAATAGCATTACTTGTGGGTCTTTTTCCTTTCAGGATACAGAGGCGTGCAGTTTTTCTATAGCATTACTTGCTGGGTTTTGTTATGAATCTTCAACCCTCTGAGGCTGAGGCGGGTTTTGACATACGTGTTTCACCAGGTACCAATGCCGAATCGCTTGAAAGAAGAATTGCAGAAGAATGGGCACCTGTGTCACGCAATATGACATATGAGTTCAAGCAAAAGGAACCTATCCAGAACAAGTTGGGGCTTCCGCTTGTGACAGTTGCAAATGATTCTAATCCATGGTGGACATTGCTAGAGGTGGCCATCTTGAAAGCCGGAGGAAAGCTTCATAAGCCAGAGATTTTCCCAGCTGCAACAGATGCTCGCTATGTGCGAGAACTTGGGATTCCTGCATTTGGGTTCTCACCAATAGCAAATACTCCTATTTTGCTTCATGATCACAATGAGTTCTTAAATGAAGCTGAATACTTAAAAGGAATTGGAGTATATGAGGCAATTATTGAATCCTATGCATCTTATGTGGAAGCTTCTGAGGATCGAGAATCTTTATCAGAGTTGTAA___AGATTCCACGTGTTTATGGCAGGCACCTCGGTTTAGTGAGAACTAGCTTCTGGAATATGCTGAGTTATTGTCCCAAAGAAGTCACCCTCATTTTCTTTGTGAAGAGAATGATTCTCATTGTTGTAAATAGATTTCTTTGGATGCTTGGAAGTTTTACATGCACTTTAAAACTATCAATGCAATTGATTACCAAATAAATGAGAACCATAGATTGTAAATAAAGAAAAACGAGGATACAGTTTCTCAATATTTCCTTGGCCAACTGAGATCATCTCAAGCATTTTAGGTAATGACTTACTAGTTTGAATTTAAAATGCGTTGGTTTCC

Fln Alignment:

AllPine_b_c24344___GFVMNLQPSEAEAGFDIRVSPGTNAESLERRIAEEWAPVSRNMTYEFKQKEPIQNKLGLPLVTVANDSNPWWTLLEVAILKAGGKLHKPEIFPAATDARYVRELGIPAFGFSPIANTPILLHDHNEFLNEAEYLKGIGVYEAIIESYASYVEASEDRESLSEL
D5A9K6________________GFIMNLQPSEAAAGFDIRLPPTADPQLVRKRISEEWAPAARNMTYQILEKGPIWDTQGRPLLTVANDSNPWWLLFEQAIMATGGKLRKPEILASTTDARFVREQGIPAFGFSPMANTPILLHDHNEFLNEGEYLKGIKVYAAIIESLSSFIESDHSIASKDEL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain