UniGene Name: sp_v3.0_unigene170036
Length: 237 nt
UniGene Fasta |
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>sp_v3.0_unigene170036
A |
Ace file of the UniGene sp_v3.0_unigene170036 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | GRP multi-domain protein | - | - | 1.0e-10 | 46% |
Sma3 | Putative glycine-rich protein | - | - | 2.016e-08 | - |
Source | Gene names |
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Sma3 | AGO3; AT4g36230; AT5G58470; At2g30560; At5g58470; CHLREDRAFT_186463; CHLREDRAFT_18730; CHLREDRAFT_195849; Ch1; F23E13.120; GAS31; GRP; GRP-2; GRP1; GRP10; H0315A08.9; HRGP gene; LOC_Os03g01320; MICPUCDRAFT_16457; MICPUCDRAFT_16484; MICPUCDRAFT_21236; MICP |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | extracellular space | GO:0005615 | Cellular Component | 0.0 | - |
Sma3 | intracellular | GO:0005622 | Cellular Component | 0.0 | - |
Sma3 | nucleus | GO:0005634 | Cellular Component | 0.0 | - |
Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
Sma3 | outer membrane | GO:0019867 | Cellular Component | 0.0 | - |
Sma3 | nucleotide binding | GO:0000166 | Molecular Function | 0.0 | - |
Sma3 | nucleic acid binding | GO:0003676 | Molecular Function | 0.0 | - |
Sma3 | DNA binding | GO:0003677 | Molecular Function | 0.0 | - |
Sma3 | RNA binding | GO:0003723 | Molecular Function | 0.0 | - |
Sma3 | metalloendopeptidase activity | GO:0004222 | Molecular Function | 0.0 | - |
Sma3 | chitinase activity | GO:0004568 | Molecular Function | 0.0 | - |
Sma3 | structural constituent of cell wall | GO:0005199 | Molecular Function | 0.0 | - |
Sma3 | calcium ion binding | GO:0005509 | Molecular Function | 0.0 | - |
Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
Sma3 | ATP-dependent helicase activity | GO:0008026 | Molecular Function | 0.0 | - |
Sma3 | zinc ion binding | GO:0008270 | Molecular Function | 0.0 | - |
Sma3 | chitin catabolic process | GO:0006032 | Biological Process | 0.0 | - |
Sma3 | regulation of transcription, DNA-dependent | GO:0006355 | Biological Process | 0.0 | - |
Sma3 | rRNA processing | GO:0006364 | Biological Process | 0.0 | - |
Sma3 | lipid transport | GO:0006869 | Biological Process | 0.0 | - |
Sma3 | metabolic process | GO:0008152 | Biological Process | 0.0 | - |
Sma3 | cell wall macromolecule catabolic process | GO:0016998 | Biological Process | 0.0 | - |
Full-Lengther Next Prediction |
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Fln status: coding
Fln database: testcode
Fln msg:
Test code: 1
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain