SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene168311

Length: 183 nt

UniGene Fasta

>sp_v3.0_unigene168311
TGTAATATATCCTGTAATTGGTATTCTGTGGGAATTTTTCAAGAACAGGGACAGGGTTCTGGAATGGACAGTGGATATTCTTTCCAGAATCCCTTCCCACACATGTATGGTCCAGCGCCCAAGAGGCGTCCGAGGCTTTATCACTGCAAATCCCTCTAATGTGGAGCATATTCTAAGAGCCAA

Ace file of the UniGene sp_v3.0_unigene168311

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative cytochrome P450 [Oryza sativa Japonica Group] gb\|EAY89085.1\| hypothetical protein OsI_10573 [Oryza sativa Indica Group]	-	-	2.0e-11	53%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	47%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G01900.1	CYP94B2 cytochrome P450, family 94, subfamily B, polypeptide 2 chr3:312359-313849 REVERSE LENGTH=496	4.0e-13	49%
RefSeq	Arabidopsis thaliana	NP_566155.1	cytochrome P450, family 94, subfamily B, polypeptide 2 [Arabidopsis thaliana]	6.0e-13	49%
RefSeq	Populus trichocarpa	XP_002322606.1	cytochrome P450 [Populus trichocarpa]	2.0e-15	51%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A7Y6

Fln msg: Distance to subject end: 451 aas, your sequence is shorter than subject: 60 - 559

Fln protein: VIYPVIGILWEFFKNRDRVLEWTVDILSRIPSHTCMVQRPRGVRGFITANPSNVEHILRA

Protein Length: 61

Fln nts: TGTAATATATCCTGTAATTGGTATTCTGTGGGAATTTTTCAAGAACAGGGACAGGGTTCTGGAATGGACAGTGGATATTCTTTCCAGAATCCCTTCCCACACATGTATGGTCCAGCGCCCAAGAGGCGTCCGAGGCTTTATCACTGCAAATCCCTCTAATGTGGAGCATATTCTAAGAGCCAA

Fln Alignment:

HIF1XHV03GAJX4___YPVIGILWEFFKNRDRVLEWTVDILSRIPSHTCMVQRPRGVRGFITANPSNVEHILR
D5A7Y6________________YPLVGSLFAFWKNRRRHIEWAAEMLAESPTQTIVVERLGGIRTVLTANPENLEHILK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain