SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene168294

Length: 131 nt

UniGene Fasta

>sp_v3.0_unigene168294
GGGCTTCTTGGAACCGACCAAGCTCTCTTTTCAGACCCACGTACAAAATATCTCGTCCAATACTTTGCCAATTACAAAACTCAGTTCTTCCAGGCTTTCGCTGCGGCCATGGACAAGATGAGCAGCATTGG

Ace file of the UniGene sp_v3.0_unigene168294

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Peroxidase 19, putative n=1 Tax=Ricinus communis RepID=B9S954_RICCO	-	-	1.0e-07	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	53%

Source	Gene names
Sma3	GSVIVT00003011001; POPTRDRAFT_276876; RCOM_1012870;

Source	GOs	Term	Type	Identity
Sma3	peroxidase activity	GO:0004601	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	response to oxidative stress	GO:0006979	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Plant peroxidase	IPR000823	-	-
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-
Sma3	Peroxidase, active site	IPR019794	-	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002305096.1	predicted protein [Populus trichocarpa]	9.0e-11	65%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5AAS6

Fln msg: Distance to subject end: 17 aas, your sequence is shorter than subject: 43 - 334

Fln protein: GLLGTDQALFSDPRTKYLVQYFANYKTQFFQAFAAAMDKMSSI

Protein Length: 44

Fln nts: GGGCTTCTTGGAACCGACCAAGCTCTCTTTTCAGACCCACGTACAAAATATCTCGTCCAATACTTTGCCAATTACAAAACTCAGTTCTTCCAGGCTTTCGCTGCGGCCATGGACAAGATGAGCAGCATTGG

Fln Alignment:

HIF1XHV03F0BMB___GLLGTDQALFSDPRTKYLVQYFANYKTQFFQAFAAAMDKMSSI
D5AAS6________________GLLGSDQILYTDPRSRVLAQRYASDQATFFDAFVAAMDKLGSV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain