SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene168279

Length: 227 nt

UniGene Fasta

>sp_v3.0_unigene168279
CATGATGAATTAGCACCACTTCCAAAGCCATTGCTTGTTGTGAATATAGGGGGACCTACAAGACATTGTAAATATGGCGCAGACCTTGCTGTAAAGCTAGTAGATGCTCTATATAAGGTGCTTGGTAAATGCGGGACTGTACGCATTTCTTTCTCGAGAAGAACGCCTCTTCAGGTGTGTAACATAATGTGGAAAGAATTTGGTAGTCATCCAAAGGTCTATATTTG

Ace file of the UniGene sp_v3.0_unigene168279

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF1022 domain containing protein	-	-	1.0e-17	37%
FL-Next	tr=Putative uncharacterized protein Sb04g021860; Sorghum bicolor (Sorghum) (Sorghum vulgare).	-	-	0.0	72%

Source	Gene names
Sma3	AT5G06180; At5g22350; ELM1; GSVIVT00021564001; GSVIVT00037313001; MWD9.14; OJ000126_13.11; OSIGBa0134P10.12; OSIGBa0137L20.3; Os04g0414000; OsI_07542; OsI_15826; OsJ_07023; OsJ_14743; PHYPADRAFT_130417; POPTRDRAFT_556843; POPTRDRAFT_576557; POPTRDRAFT_594

Source	GOs	Term	Type	e value	Identity
Sma3	mitochondrial outer membrane	GO:0005741	Cellular Component	0.0	-
Sma3	mitochondrial fission	GO:0000266	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Mitochondrial fission ELM1-like	IPR009367	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G22350.1	ELM1 Protein of unknown function (DUF1022) chr5:7397762-7400746 REVERSE LENGTH=427	6.0e-25	58%
RefSeq	Arabidopsis thaliana	NP_568417.1	uncharacterized protein [Arabidopsis thaliana]	8.0e-25	58%
RefSeq	Populus trichocarpa	XP_002313610.1	predicted protein [Populus trichocarpa]	4.0e-26	65%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: C5XU00

Fln msg: Distance to subject end: 104 aas, your sequence is shorter than subject: 75 - 427

Fln protein: HDELAPLPKPLLVVNIGGPTRHCKYGADLAVKLVDALYKVLGKCGTVRISFSRRTPLQVCNIMWKEFGSHPKVYI

Protein Length: 76

Fln nts: CATGATGAATTAGCACCACTTCCAAAGCCATTGCTTGTTGTGAATATAGGGGGACCTACAAGACATTGTAAATATGGCGCAGACCTTGCTGTAAAGCTAGTAGATGCTCTATATAAGGTGCTTGGTAAATGCGGGACTGTACGCATTTCTTTCTCGAGAAGAACGCCTCTTCAGGTGTGTAACATAATGTGGAAAGAATTTGGTAGTCATCCAAAGGTCTATATTTG

Fln Alignment:

HIF1XHV03GJJCP___HDELAPLPKPLLVVNIGGPTRHCKYGADLAVKLVDALYKVLGKCGTVRISFSRRTPLQVCNIMWKEFGSHPKVYI
C5XU00________________HDELAPLPKPLLIVNIGGPTRNCKYGVDLAKQLITSLYNVLDSCGSVRISFSPRTPWKVADIVFKEFAGHPKVYI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain