SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene168081

Length: 100 nt

UniGene Fasta

>sp_v3.0_unigene168081
ATTATCCATGGCTTTGCTGTGCCTCTCAGGGAAGAGCACAAGCTGTTCCTGAGGAGGGTTCTGATGCCCTTGCATAAGCCCAAGTGCTTTGAATGCTTAT

Ace file of the UniGene sp_v3.0_unigene168081

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PP2A-widerborst subunit n=2 Tax=Chlamydomonadales RepID=A8HS05_CHLRE	-	-	5.0e-07	82%
FL-Next	sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	79%
Sma3	Protein phosphatase 2a, regulatory subunit, putative	-	-	8.887e-08	-

Source	Gene names
Sma3	At3g21650; B'ZETA; B'teta; B'zeta; B1029H08.25; B1203H11.34; CHLREDRAFT_127638; GSVIVT00020577001; GSVIVT00025928001; GSVIVT00035107001; H0805A05.14; LOC_Os03g62730; MIL23.22; OJ000223_09.6; OSJNBa0032G11.16; OSJNBa0073J19.11; OSJNBa0081L15.16; OSJNBa0091

Source	GOs	Term	Type	Identity
Sma3	protein phosphatase type 2A complex	GO:0000159	Cellular Component	-
Sma3	protein phosphatase type 2A regulator activity	GO:0008601	Molecular Function	-
Sma3	signal transduction	GO:0007165	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Glycoside hydrolase, chitinase active site	IPR001579	-	0.0	-
Sma3	Protein phosphatase 2A, regulatory B subunit, B56	IPR002554	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9LVE2

Fln msg: Distance to subject end: 206 aas, your sequence is shorter than subject: 33 - 546

Fln protein: IIHGFAVPLREEHKLFLRRVLMPLHKPKCFECL

Protein Length: 34

Fln nts: ATTATCCATGGCTTTGCTGTGCCTCTCAGGGAAGAGCACAAGCTGTTCCTGAGGAGGGTTCTGATGCCCTTGCATAAGCCCAAGTGCTTTGAATGCTTAT

Fln Alignment:

HIF1XHV03F520J___IIHGFAVPLREEHKLFLRRVLMPLHKPKC
Q9LVE2________________IINGFALPLKEEHKLFLLRALIPLHKPKC

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain