SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene168003

Length: 204 nt

UniGene Fasta

>sp_v3.0_unigene168003
ACCTCCCGTAGTGGCATTCTAATGAAGCTAGCTATACGCTTCAGTCGTAAACAAGAATAATTGCTAGTAAAATGTAGATTTGGTTACAGAGACGGACAAGGCATGTGAGAAGATAATTTTCCAACATCTAAAGCAAAAATACCCAGATCATCAGTTCATAGGCGAAGAAACTTCTGCGATCTATGGAACTGCTGATTTGACTGA

Ace file of the UniGene sp_v3.0_unigene168003

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	3.1.2 inositol monophosphatase n=3 Tax=Phaseoleae RepID=C1LZ50_PHAVU	-	-	3.0e-10	74%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	76%
Sma3	L-galactose-1-phosphate phosphatase	-	-	9.359e-18	-

Source	ECs	Term	Type	e value	Identity
Sma3	Inositol-phosphate phosphatase.	EC:3.1.3.25	-	1.276e-19	-

Source	KEGGs	Term	e value	Identity
Sma3	Inositol phosphate metabolism	00562	1.276e-19	%
Sma3	Metabolic pathways	01100	1.276e-19	%
Sma3	Biosynthesis of secondary metabolites	01110	1.276e-19	%
Sma3	Phosphatidylinositol signaling system	04070	1.276e-19	%

Source	Gene names
Sma3	GPP; GSVIVT00012468001; IMP; IMP-1; IMP-2; IMP1; IMP2; IMP3; LOC_Os03g39000; OSJNBa0010D22.28; Os03g0587000; OsI_12408; PHYPADRAFT_205419; POPTRDRAFT_716898; POPTRDRAFT_808295; RCOM_1144730; VITISV_020873;

Source	GOs	Term	Type	Identity
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	inositol or phosphatidylinositol phosphatase activity	GO:0004437	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	inositol monophosphate 1-phosphatase activity	GO:0008934	Molecular Function	-
Sma3	lithium ion binding	GO:0031403	Molecular Function	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Inositol monophosphatase	IPR000760	-	0.0	-
Sma3	Mo25-like	IPR013878	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G02870.1	VTC4 Inositol monophosphatase family protein chr3:627742-629682 REVERSE LENGTH=271	8.0e-13	61%
RefSeq	Arabidopsis thaliana	NP_001118558.1	inositol-phosphate phosphatase [Arabidopsis thaliana]	1.0e-12	61%
RefSeq	Populus trichocarpa	XP_002307895.1	predicted protein [Populus trichocarpa]	9.0e-14	69%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NP29

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 187 aas, your sequence is shorter than subject: 67 - 271

Fln protein: PPVVAF**S*LYASVVNKNNC**NVDLVTETDKACEKIIFQHLKQKYPDHQFIGEETSAIYGTADLT

Protein Length: 68

Fln nts: ACCTCCCGTAGTGGCATTCTAATGAAGCTAGCTATACGCTTCAGTCGTAAACAAGAATAATTGCTAGTAAAATGTAGATTTGGTTACAGAGACGGACAAGGCATGTGAGAAGATAATTTTCCAACATCTAAAGCAAAAATACCCAGATCATCAGTTCATAGGCGAAGAAACTTCTGCGATCTATGGAACTGCTGATTTGACTGA

Fln Alignment:

HIF1XHV03GMX6V___TETDKACEKIIFQHLKQKYPDHQFIGEETSAIYGTADLT
A9NP29________________TETDKACEELAFQFLKQKYPEHKFIGEETSAVHGTDDLT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain