UniGene Name: sp_v3.0_unigene167403
Length: 81 nt
UniGene Fasta |
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>sp_v3.0_unigene167403
G |
Ace file of the UniGene sp_v3.0_unigene167403 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | R2R3-MYB transcription factor MYB13 (Fragment) n=1 Tax=Pinus taeda RepID=C0JTD9_PINTA | - | - | 1.0e-07 | 100% |
FL-Next | tr=R2R3-MYB transcription factor MYB13; Picea glauca (White spruce) (Pinus glauca). | - | - | 0.0 | 100% |
Sma3 | MYB-like DNA-binding domain protein | - | - | 3.274e-09 | - |
Source | Gene names |
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Sma3 | At1g22640; At1g71030; At2g16720; At4g09460; At4g34990; At4g38620; AtMYB3; C1; C1-B73; C1-I; DcMYB3-1; DcMYB3-2; F12K8.1; F20M13.180; F23N20.2; FcMYB303A1; FcMYB303A2; FcMYBC6; GSVIVT00002700001; GSVIVT00006679001; GSVIVT00008644001; GSVIVT00009522001; GSV |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | nucleus | GO:0005634 | Cellular Component | 0.0 | - |
Sma3 | DNA binding | GO:0003677 | Molecular Function | 0.0 | - |
Sma3 | cysteine-type peptidase activity | GO:0008234 | Molecular Function | 0.0 | - |
Sma3 | regulation of transcription, DNA-dependent | GO:0006355 | Biological Process | 0.0 | - |
Sma3 | proteolysis | GO:0006508 | Biological Process | 0.0 | - |
Sma3 | response to salt stress | GO:0009651 | Biological Process | 0.0 | - |
Sma3 | anthocyanin biosynthetic process | GO:0009718 | Biological Process | 0.0 | - |
Sma3 | response to ethylene stimulus | GO:0009723 | Biological Process | 0.0 | - |
Sma3 | response to auxin stimulus | GO:0009733 | Biological Process | 0.0 | - |
Sma3 | response to abscisic acid stimulus | GO:0009737 | Biological Process | 0.0 | - |
Sma3 | response to gibberellin stimulus | GO:0009739 | Biological Process | 0.0 | - |
Sma3 | response to salicylic acid stimulus | GO:0009751 | Biological Process | 0.0 | - |
Sma3 | response to jasmonic acid stimulus | GO:0009753 | Biological Process | 0.0 | - |
Sma3 | proanthocyanidin biosynthetic process | GO:0010023 | Biological Process | 0.0 | - |
Sma3 | GO:0045449 | Biological Process | 0.0 | - | |
Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | SANT/Myb domain | IPR001005 | - | 0.0 | - |
Sma3 | Peptidase C48, SUMO/Sentrin/Ubl1 | IPR003653 | - | 0.0 | - |
Sma3 | Transposon, En/Spm-like | IPR004242 | - | 0.0 | - |
Sma3 | IPR012287 | - | 0.0 | - | |
Sma3 | IPR014778 | - | 0.0 | - | |
Sma3 | Myb transcription factor | IPR015495 | - | 0.0 | - |
Sma3 | Myb domain, DNA-binding | IPR017930 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT1G22640.1 | ATMYB3, MYB3 myb domain protein 3 chr1:8006289-8007219 FORWARD LENGTH=257 | 4.0e-12 | 96% |
RefSeq | Arabidopsis thaliana | NP_564176.2 | transcription factor MYB3 [Arabidopsis thaliana] | 5.0e-12 | 96% |
RefSeq | Populus trichocarpa | XP_002306180.1 | predicted protein [Populus trichocarpa] | 6.0e-12 | 96% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: A5JYF7
Fln msg: Distance to subject end: 94 aas, your sequence is shorter than subject: 27 - 196
Fln protein:
D
Protein Length:
28
Fln nts:
G
Fln Alignment:
HIF1XHV01A6LQ8___DDLIIKLHSLLGNKWSLIAGRLPGRTD
A5JYF7________________DDLIIKLHSLLGNKWSLIAGRLPGRTD
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain