SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene167318

Length: 196 nt

UniGene Fasta

>sp_v3.0_unigene167318
CTGCTAGCTGTGGCATATAATCATGATCTCAGGCTGCTCGTCGACCAGCTGAATAAAAAATTAGACGGAGCAACGATCCTGCTCGTTAACGCTTATGATTTCGTATTAAAGATAATTGAAAACGGAAAATCCTATGGTTTTGAAAACACGACGTCTGCTTGCTGTGGAGCGGGGCCTTTTAACACGGCTGTGTCTT

Ace file of the UniGene sp_v3.0_unigene167318

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SYX7_RICCO	-	-	2.0e-08	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	71%

Source	GOs	Term	Type	e value	Identity
Sma3	lipase activity	GO:0016298	Molecular Function	0.0	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipase, GDSL	IPR001087	-	0.0	-
Sma3	Lipase, GDSL, active site	IPR008265	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G23540.1	GDSL-like Lipase/Acylhydrolase superfamily protein chr2:10024366-10026058 FORWARD LENGTH=387	2.0e-12	49%
RefSeq	Arabidopsis thaliana	NP_179935.1	GDSL esterase/lipase [Arabidopsis thaliana]	3.0e-12	49%
RefSeq	Populus trichocarpa	XP_002310763.1	predicted protein [Populus trichocarpa]	2.0e-12	49%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LR47

Fln msg: Distance to subject end: 64 aas, your sequence is shorter than subject: 65 - 373

Fln protein: LLAVAYNHDLRLLVDQLNKKLDGATILLVNAYDFVLKIIENGKSYGFENTTSACCGAGPFNTAVS

Protein Length: 66

Fln nts: CTGCTAGCTGTGGCATATAATCATGATCTCAGGCTGCTCGTCGACCAGCTGAATAAAAAATTAGACGGAGCAACGATCCTGCTCGTTAACGCTTATGATTTCGTATTAAAGATAATTGAAAACGGAAAATCCTATGGTTTTGAAAACACGACGTCTGCTTGCTGTGGAGCGGGGCCTTTTAACACGGCTGTGTCTT

Fln Alignment:

HIF1XHV01B4C5W___LAVAYNHDLRLLVDQLNKKLDGATILLVNAYDFVLKIIENGKSYGFENTTSACCGAGPFNTAVS
B8LR47________________LAVAYNDGLTQLINNLNKQLDGTTILIANVYDFLLNIIQHGESYGFKNTTSACCGAGPFNTAVS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain