SustainPineDB

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Assembly info
Unigenes
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SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene167213

Length: 356 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v3.0_unigene167213
AAACCAGGAGGGGCTCAATATGGACGAAGCATTCGGCCTGGCCCTGCAGAAGGCCGTGCCTCTCGTGGCCAAGGCCACTCCTCGCCTTCCTCTTCATCTCTACTAATTACTGATATGCCTGCACCCTCCAAAAGTTGTGAGTTAAAATAAAGTCTGTTCAATATATGTGCACTTTACTTTCAAATTCCCTTGATGGTGTATAATGTGCACTTACTTTCAAATTCCCTTGAAATTCCCTTGATGGTGTTTGATTCTGTACGAAGGGATTGTTTCATGTGGGTCTTTTTGATAAATCTGTTGTTCTTGTATTTTAAATTTACGTTTATGGACTATGGACAAATTTATCGGTATTGACC

Ace file of the UniGene sp_v3.0_unigene167213 (antisense)

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%
Sma3	Flavonoid 3',5'-hydroxylase	-	-	7.342e-07	-

Source	Gene names
Sma3	5'H; CYP75A5; CYP75A7; F3';

Source	GOs	Term	Type	Identity
Sma3	monooxygenase activity	GO:0004497	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	flavonoid 3',5'-hydroxylase activity	GO:0033772	Molecular Function	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LN92

Fln msg: your sequence is shorter than subject: 35 - 452

Fln protein: NQEGLNMDEAFGLALQKAVPLVAKATPRLPLHLY*

Protein Length: 36

Fln nts: AAACCAGGAGGGGCTCAATATGGACGAAGCATTCGGCCTGGCCCTGCAGAAGGCCGTGCCTCTCGTGGCCAAGGCCACTCCTCGCCTTCCTCTTCATCTCTACTAA___TTACTGATATGCCTGCACCCTCCAAAAGTTGTGAGTTAAAATAAAGTCTGTTCAATATATGTGCACTTTACTTTCAAATTCCCTTGATGGTGTATAATGTGCACTTACTTTCAAATTCCCTTGAAATTCCCTTGATGGTGTTTGATTCTGTACGAAGGGATTGTTTCATGTGGGTCTTTTTGATAAATCTGTTGTTCTTGTATTTTAAATTTACGTTTATGGACTATGGACAAATTTATCGGTATTGACC

Fln Alignment:

HIF1XHV01BAZ4D___NQEGLNMDEAFGLALQKAVPLVAKAT
B8LN92________________NQDGLNMDEAFGLALQKAVPLVAKAS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain