SustainPineDB

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Assembly info
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene167149

Length: 205 nt

UniGene Fasta

>sp_v3.0_unigene167149
ATGCATGGTCATTGAAAGCAAATCCAGAAGAAGGATATGTTTCTTCAGTTGTACTTGGACCCTGTCAGAATTGGCTTATGTCAGGTTCTTCCAGAGGTGTGCTTACCCTTTGGGATTTGCGGTTTCTTATCCCAGTAAATACATGGCAGTATACCAAGGGTTGCCCTGTGGAGAAAATGTGTCTTCTAATGCCAGCTACAAATTC

Ace file of the UniGene sp_v3.0_unigene167149

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RKG4_RICCO	-	-	3.0e-25	76%
FL-Next	tr=ATP binding protein, putative; Ricinus communis (Castor bean).	-	-	0.0	76%

Source	Gene names
Sma3	At4g29380; GSVIVT00016649001; OJ1004_E04.19; Os02g0796700; OsI_09285; OsJ_08723; PHYPADRAFT_144257; PHYPADRAFT_234965; POPTRDRAFT_653324; RCOM_1049310;

Source	GOs	Term	Type	Identity
Sma3	protein kinase activity	GO:0004672	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	protein tyrosine kinase activity	GO:0004713	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	HEAT	IPR000357	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	WD40 repeat	IPR001680	-	-
Sma3	Immunoglobulin/major histocompatibility complex, conserved site	IPR003006	-	-
Sma3	Ureohydrolase	IPR006035	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	WD40/YVTN repeat-like-containing domain	IPR015943	-	-
Sma3		IPR017442	-	-
Sma3	WD40-repeat-containing domain	IPR017986	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-
Sma3		IPR019782	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G29380.1	protein kinase family protein / WD-40 repeat family protein chr4:14458822-14464692 FORWARD LENGTH=1494	9.0e-29	77%
RefSeq	Arabidopsis thaliana	NP_194667.1	phosphoinositide-3-kinase, regulatory subunit 4, p150 [Arabidopsis thaliana]	1.0e-28	77%
RefSeq	Populus trichocarpa	XP_002308305.1	predicted protein [Populus trichocarpa]	5.0e-31	74%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9RKG4

Fln msg: Distance to subject end: 205 aas, your sequence is shorter than subject: 67 - 1455

Fln protein: AWSLKANPEEGYVSSVVLGPCQNWLMSGSSRGVLTLWDLRFLIPVNTWQYTKGCPVEKMCLLMPATN

Protein Length: 68

Fln nts: ATGCATGGTCATTGAAAGCAAATCCAGAAGAAGGATATGTTTCTTCAGTTGTACTTGGACCCTGTCAGAATTGGCTTATGTCAGGTTCTTCCAGAGGTGTGCTTACCCTTTGGGATTTGCGGTTTCTTATCCCAGTAAATACATGGCAGTATACCAAGGGTTGCCCTGTGGAGAAAATGTGTCTTCTAATGCCAGCTACAAATTC

Fln Alignment:

HLKU4M003G7KSU___AWSLKANPEEGYVSSVVLGPCQNWLMSGSSRGVLTLWDLRFLIPVNTWQYTKGCPVEKMCLLMPATN
B9RKG4________________AWTLKAVPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLIPVNSWQYSLVCPIEKMCLFVPPSN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain