SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene165469

Length: 246 nt

UniGene Fasta

>sp_v3.0_unigene165469
CACAACGAAATGTGAAGGTCGCTGTGAAAATGTCAAACTTCAAATGGGGGATTATCAGTTTGCCATACACATGGGAGGATGCGACATTGTCCTCGATGTTGAATGGTTCCGCACTCTTGGGCCAATCACAATGGATTTCCAGGGGTTATATATGAGTTTTAAGCATAACAATTCCACAAATACCCTCCATGGACTGCAGGCGGGAGCTCCCTCTATCATCAGCACGCATAGGATGGAAAAATTGCT

Ace file of the UniGene sp_v3.0_unigene165469

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH	-	-	4.0e-06	39%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	35%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A5C5K2

Fln msg: Distance to subject end: 858 aas, your sequence is shorter than subject: 81 - 1360

Fln protein: TTKCEGRCENVKLQMGDYQFAIHMGGCDIVLDVEWFRTLGPITMDFQGLYMSFKHNNSTNTLHGLQAGAPSIISTHRMEKL

Protein Length: 82

Fln nts: CACAACGAAATGTGAAGGTCGCTGTGAAAATGTCAAACTTCAAATGGGGGATTATCAGTTTGCCATACACATGGGAGGATGCGACATTGTCCTCGATGTTGAATGGTTCCGCACTCTTGGGCCAATCACAATGGATTTCCAGGGGTTATATATGAGTTTTAAGCATAACAATTCCACAAATACCCTCCATGGACTGCAGGCGGGAGCTCCCTCTATCATCAGCACGCATAGGATGGAAAAATTGCT

Fln Alignment:

HLKU4M003F74EE___KCEGRCENVKLQMGDYQ-----FAIHMGGCDIVLDVEWFRTLGPITMDFQGLYMSFKHNNSTNTLHGL
A5C5K2________________ECAGQCRSLTLTIQGYSVTADYYILPVAACQLVLGVQWLETLGPIEMDYKQLTMNFKMEGTSHTFQGL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain