SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene165235

Length: 157 nt

UniGene Fasta

>sp_v3.0_unigene165235
ACCATGTTCCTTACGGGCGGGATTTTAACGACCATAAACCCACCGGAAGGTTTTCTAATGGCAAATTAGCAACGGATTTTCTCTCTGCAGCATTGGGACTGAAGGAGACATTGCCAGCATATTTAGACCCTGCGCTGACTTCCCAAGACCTAATCAC

Ace file of the UniGene sp_v3.0_unigene165235

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SQQ5_RICCO	-	-	2.0e-12	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	70%
Sma3	Zinc finger protein, putative	-	-	3.497e-10	-

Source	Gene names
Sma3	At2g04570; At4g26790; F10M23.130; GSVIVT00014375001; GSVIVT00027264001; OSJNBa0095O23.40-1; OSJNBa0095O23.40-2; Os09g0132900; OsI_30465; OsJ_28453; P0406E03.14-1; P0406E03.14-2; POPTRDRAFT_573029; RCOM_0362920; RCOM_0546610; RCOM_0839620; RCOM_0839630; T1

Source	GOs	Term	Type	e value	Identity
Sma3	hydrolase activity, acting on ester bonds	GO:0016788	Molecular Function	0.0	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Lipase, GDSL	IPR001087	-	-
Sma3	Lipase, GDSL, active site	IPR008265	-	-
Sma3	Beta-ketoacyl synthase, active site	IPR018201	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G04570.1	GDSL-like Lipase/Acylhydrolase superfamily protein chr2:1594747-1596129 FORWARD LENGTH=350	4.0e-16	68%
RefSeq	Arabidopsis thaliana	NP_178536.1	GDSL esterase/lipase [Arabidopsis thaliana]	5.0e-16	68%
RefSeq	Populus trichocarpa	XP_002319957.1	predicted protein [Populus trichocarpa]	1.0e-15	60%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9P0U2

Fln msg: Distance to subject end: 248 aas, your sequence is shorter than subject: 51 - 359

Fln protein: HVPYGRDFNDHKPTGRFSNGKLATDFLSAALGLKETLPAYLDPALTSQDLI

Protein Length: 52

Fln nts: ACCATGTTCCTTACGGGCGGGATTTTAACGACCATAAACCCACCGGAAGGTTTTCTAATGGCAAATTAGCAACGGATTTTCTCTCTGCAGCATTGGGACTGAAGGAGACATTGCCAGCATATTTAGACCCTGCGCTGACTTCCCAAGACCTAATCAC

Fln Alignment:

HA8LWWM01C78CC___VPYGRDFNDHKPTGRFSNGKLATDFLSAALGLKETLPAYLDPALTSQDLI
A9P0U2________________LPYGRDFTGHRPTGRFSNGRLTTDFLAEGLGIKETVPAYLDPGLTPEDLL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain