SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene164955

Length: 165 nt

UniGene Fasta

>sp_v3.0_unigene164955
TTTCGGATGCAGGTGGAGGACTCGCGCTGAACTTCTATGACAAGACTTGCCCCGCAGTTTATAACACAGTAGAGAGTGTAGTTGGACAGTACATCTCCAAAGCCCCAACTCTGGCGGCTCCTCTTCTCAGAATGCAGTTTCATGACTGCTTTGTTAGAGGTTGCG

Ace file of the UniGene sp_v3.0_unigene164955

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	peroxidase 27 [Arabidopsis thaliana] sp\|Q43735.1\|PER27_ARATH RecName: Full=Peroxidase 27; Short=Atperox P27; AltName: Full=ATP12a; AltName: Full=PRXR7; Flags: Precursor gb\|AAF26155.1\|AC008261_12 putative peroxidase [Arabidopsis thaliana] emb\|CAA66963.1\| p	-	-	1.0e-10	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	79%

Source	Gene names
Sma3	At3g01190; GSVIVT00026051001; GSVIVT00026052001; P27; PER27; RCOM_0231780; T4P13.12;

Source	GOs	Term	Type	Identity
Sma3	extracellular region	GO:0005576	Cellular Component	-
Sma3	peroxidase activity	GO:0004601	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	response to oxidative stress	GO:0006979	Biological Process	-
Sma3	hydrogen peroxide catabolic process	GO:0042744	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Plant peroxidase	IPR000823	-	-
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-
Sma3	Peroxidase, active site	IPR019794	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G01190.1	Peroxidase superfamily protein chr3:67236-68477 REVERSE LENGTH=321	2.0e-15	63%
RefSeq	Arabidopsis thaliana	NP_186768.1	peroxidase 27 [Arabidopsis thaliana]	2.0e-15	63%
RefSeq	Populus trichocarpa	XP_002338764.1	predicted protein, partial [Populus trichocarpa]	1.0e-14	56%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9P1P4

Fln msg: Distance to subject end: 249 aas, your sequence is shorter than subject: 54 - 324

Fln protein: SDAGGGLALNFYDKTCPAVYNTVESVVGQYISKAPTLAAPLLRMQFHDCFVRGC

Protein Length: 55

Fln nts: TTTCGGATGCAGGTGGAGGACTCGCGCTGAACTTCTATGACAAGACTTGCCCCGCAGTTTATAACACAGTAGAGAGTGTAGTTGGACAGTACATCTCCAAAGCCCCAACTCTGGCGGCTCCTCTTCTCAGAATGCAGTTTCATGACTGCTTTGTTAGAGGTTGCG

Fln Alignment:

HA8LWWM01DUT6S___SDAGGGLALNFYDKTCPAVYNTVESVVGQYISKAPTLAAPLLRMQFHDCFVRGC
A9P1P4________________TDAAGGLELNFYDKTCPGVSNVVEAVIAHYISKAPTLAAPLLRMHFHDCFVRGC

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain