SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene164474

Length: 224 nt

UniGene Fasta

>sp_v3.0_unigene164474
TGTTGACAAGCTAGCTATTGAATTAAGCGTAAAACAAAGTAGCATGGCAGAGCTTGAATGGTATAAAGAGCGATGTGAGAAGGATGGTGGCATCGGATATTATGATACCTTCAAGGAACAAGACAAGAAGGATATCCGTGCTGATCGCCATAGGATAATACTCGCCGGGTTTTGGGATGACGTCATTGAAAGGTGGGAAACTGACGATTTGCCCAGTGATTTCC

Ace file of the UniGene sp_v3.0_unigene164474

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	protein PHYTOALEXIN DEFICIENT 4 [Arabidopsis thaliana] gb\|AAF09479.1\|AF188329_1 phytoalexin-deficient 4 protein [Arabidopsis thaliana] emb\|CAB43438.1\| putative protein [Arabidopsis thaliana] gb\|ABR46037.1\| phytoalexin deficient 4 [Arabidopsis thaliana] gb	-	-	2.0e-09	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	69%
Sma3	Putative uncharacterized protein	-	-	2.176e-06	-

Source	GOs	Term	Type	e value	Identity
Sma3	triglyceride lipase activity	GO:0004806	Molecular Function	0.0	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipase, class 3	IPR002921	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002307051.1	PAD4 [Populus trichocarpa]	5.0e-14	45%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NW04

Fln msg: Distance to subject end: 161 aas, your sequence is shorter than subject: 74 - 616

Fln protein: VDKLAIELSVKQSSMAELEWYKERCEKDGGIGYYDTFKEQDKKDIRADRHRIILAGFWDDVIERWETDDLPSDF

Protein Length: 75

Fln nts: TGTTGACAAGCTAGCTATTGAATTAAGCGTAAAACAAAGTAGCATGGCAGAGCTTGAATGGTATAAAGAGCGATGTGAGAAGGATGGTGGCATCGGATATTATGATACCTTCAAGGAACAAGACAAGAAGGATATCCGTGCTGATCGCCATAGGATAATACTCGCCGGGTTTTGGGATGACGTCATTGAAAGGTGGGAAACTGACGATTTGCCCAGTGATTTCC

Fln Alignment:

HA8LWWM01EQERO___VDKLAIELSVKQSSMAELEWYKERCEKDGGIGYYDTFKEQ-DKKDIRADRHRIILAGFWDDVIERWETDDLPSDF
A9NW04________________VDKLAIELSLKQSSMAELEWYKERCEKEDGITYYDSFKKQNNRKDFRANVDRKKLCQFWDEIIEKWEGHELPSDF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain