SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene164411

Length: 160 nt

UniGene Fasta

>sp_v3.0_unigene164411
TGCGAGATATGATCATCAGTTTCATTTTGGCAGGCAGGGACACCACATCATCGGCATTAACGTGGTTTTTCTGGCTCCTATCCTCTCATCCCCACGTAGAGGAAACCATTTACAAAGACATAGCGCACCTCATCGCCGCGAGAAGATCCCAAGATAAAGA

Ace file of the UniGene sp_v3.0_unigene164411

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative cytochrome P450 [Oryza sativa Japonica Group] gb\|EAY89085.1\| hypothetical protein OsI_10573 [Oryza sativa Indica Group]	-	-	1.0e-10	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%
Sma3	Cytochrome P450-dependent fatty acid hydroxylase	-	-	2.106e-11	-

Source	Gene names
Sma3	AT4g39510; At1g34540; At3g56630; At4g39510; CYP94A10; CYP94A13; CYP94A14; CYP94A2; CYP94A3; CYP94A5; CYP94A6; CYP94A9v1; CYP94A9v2; CYP94D23v1; CYP94D23v2; GSVIVT00023301001; GSVIVT00023878001; LOC_Os03g12260; LOC_Os11g29290; OJ1743A09.17; Os01g0804400; O

Source	GOs	Term	Type	Identity
Sma3	endoplasmic reticulum membrane	GO:0005789	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	monooxygenase activity	GO:0004497	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G34540.1	CYP94D1 cytochrome P450, family 94, subfamily D, polypeptide 1 chr1:12637054-12638550 FORWARD LENGTH=498	1.0e-14	72%
RefSeq	Arabidopsis thaliana	NP_174713.1	cytochrome P450, family 94, subfamily D, polypeptide 1 [Arabidopsis thaliana]	1.0e-14	72%
RefSeq	Populus trichocarpa	XP_002310074.1	cytochrome P450 [Populus trichocarpa]	5.0e-14	56%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A7Y6

Fln msg: Distance to subject end: 172 aas, your sequence is shorter than subject: 52 - 559

Fln protein: RDMIISFILAGRDTTSSALTWFFWLLSSHPHVEETIYKDIAHLIAARRSQDK

Protein Length: 53

Fln nts: TGCGAGATATGATCATCAGTTTCATTTTGGCAGGCAGGGACACCACATCATCGGCATTAACGTGGTTTTTCTGGCTCCTATCCTCTCATCCCCACGTAGAGGAAACCATTTACAAAGACATAGCGCACCTCATCGCCGCGAGAAGATCCCAAGATAAAGA

Fln Alignment:

HA8LWWM01BGRQN___RDMIISFILAGRDTTSSALTWFFWLLSSHPHVEETIYKDIAHLIAARRSQD
D5A7Y6________________RDMIISFILAGRDTTSSALTWFFWLLSSHPHVGEAIYKEIAHLIAA-RSQD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain