SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene164253

Length: 230 nt

UniGene Fasta

>sp_v3.0_unigene164253
CAGCAGCCACTGAACAGGGAATCGAGTTTATCTTCATATCGATCGTCTAATTTCAGTAGAGGATGGCAGGAGGCTGTCTAGTGGTAGTGAGAGCGTCAAACGAAAGAGCACAGCAATACCAGGGAGGAGTAACTCTGTATGGTGTTGTTGCGTGCATGGTTGCTGCCATTGGGGGCGCCATCTTCGGCTATGATATCGGCATATCTGGCGGAGTGACATCCATGGACCCG

Ace file of the UniGene sp_v3.0_unigene164253

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Sugar transport protein 7 n=2 Tax=Arabidopsis RepID=STP7_ARATH	-	-	8.0e-14	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	73%
Sma3	Sugar carrier protein A	-	-	1.218e-08	-

Source	Gene names
Sma3	AGAA.1; At4g02050; At4g21480; F18E5.100; GSVIVT00004559001; GSVIVT00005628001; GSVIVT00009747001; GSVIVT00030854001; HT3; HT4; HT7; MST1; MST2; Os09g0416200; OsI_31368; OsJ_29366; P0014G10.11; P0707C02.31; PHYPADRAFT_202191; POPTRDRAFT_1107160; POPTRDRAFT

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	sugar:hydrogen symporter activity	GO:0005351	Molecular Function	-
Sma3	substrate-specific transmembrane transporter activity	GO:0022891	Molecular Function	-
Sma3	carbohydrate transport	GO:0008643	Biological Process	-
Sma3	transmembrane transport	GO:0055085	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Sugar/inositol transporter	IPR003663	-	-
Sma3	General substrate transporter	IPR005828	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G02050.1	STP7 sugar transporter protein 7 chr4:898387-900095 REVERSE LENGTH=513	1.0e-18	69%
RefSeq	Arabidopsis thaliana	NP_192114.1	sugar transport protein 7 [Arabidopsis thaliana]	1.0e-18	69%
RefSeq	Populus trichocarpa	XP_002308382.1	predicted protein [Populus trichocarpa]	4.0e-17	61%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LQ43

Fln msg: Distance to subject end: 461 aas, your sequence is shorter than subject: 56 - 517

Fln protein: MAGGCLVVVRASNERAQQYQGGVTLYGVVACMVAAIGGAIFGYDIGISGGVTSMDP

Protein Length: 57

Fln nts: CAGCAGCCACTGAACAGGGAATCGAGTTTATCTTCATATCGATCGTCTAATTTCAGTAGAGG_-_ATGGCAGGAGGCTGTCTAGTGGTAGTGAGAGCGTCAAACGAAAGAGCACAGCAATACCAGGGAGGAGTAACTCTGTATGGTGTTGTTGCGTGCATGGTTGCTGCCATTGGGGGCGCCATCTTCGGCTATGATATCGGCATATCTGGCGGAGTGACATCCATGGACCCG

Fln Alignment:

HA8LWWM01DE06C___MAGGCLVVVRASNERAQQYQGGVTLYGVVACMVAAIGGAIFGYDIGISGGVTSMDP
B8LQ43________________MIGGCARGVGMSKERAERYQGRVTLYVVVACMIAALGGCVFGYDIGISGGVTSMDP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain