SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene164251

Length: 220 nt

UniGene Fasta

>sp_v3.0_unigene164251
AAATAAACAGTGGAGGAGGAGACGGGGAGAAGCCGCTGCGATGTCAGGAGGGCGATATCTTCAGTACTCTCCGGCGGCCAGAGCTCCCTCCCCTCAGATGGGAGGGATGCGCACTGCATCAATGCCTGCAGACCACGATACCAGCAGGTACTTGACGGAACTCTTGGCAGAGCGTCAGAAGCTCAGTCCGTTATGCAAGTCCTACCAATTGCAGTCGTCT

Ace file of the UniGene sp_v3.0_unigene164251

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%

Source	InterPros	Term	Type	e value	Identity
Sma3	K Homology domain	IPR004087	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLA9

Fln msg: Distance to subject end: 227 aas, your sequence is shorter than subject: 60 - 289

Fln protein: MSGGRYLQYSPAARAPSPQMGGMRTASMPADHDTSRYLTELLAERQKLSPLCKSYQLQSS

Protein Length: 61

Fln nts: AAATAAACAGTGGAGGAGGAGACGGGGAGAAGCCGCTGCG_-_ATGTCAGGAGGGCGATATCTTCAGTACTCTCCGGCGGCCAGAGCTCCCTCCCCTCAGATGGGAGGGATGCGCACTGCATCAATGCCTGCAGACCACGATACCAGCAGGTACTTGACGGAACTCTTGGCAGAGCGTCAGAAGCTCAGTCCGTTATGCAAGTCCTACCAATTGCAGTCGTCT

Fln Alignment:

HA8LWWM01AQYHJ___MSGGRYLQYSPAARAPSPQMGGMRTASMPADHDT--SRYLTELLAERQKLSP
B8LLA9________________MSGGRYLQYSPAARAPSPQMGGMRTSSMPADHDTSSSRYLAELLAERQKLSP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain