SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene163934

Length: 183 nt

UniGene Fasta

>sp_v3.0_unigene163934
AAGCTCCATTACATACTGCTCACATGGCAGCCTCTATGGACTCGACGGATCGTGTTTTGGCTAATGGCGGGCAACAGATCAACTCATCAGTTGAATCTGCAGCGATCCATGAAGTCCAGCTTTACGAGATGATACTCTCTGCTGCCAAGCCCATGGCTTTAAAAGCAGCCGTGTCGCTCAACA

Ace file of the UniGene sp_v3.0_unigene163934

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	1.0e-07	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	67%

Source	GOs	Term	Type	e value	Identity
Sma3	O-methyltransferase activity	GO:0008171	Molecular Function	0.0	-
Sma3	protein dimerization activity	GO:0046983	Molecular Function	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	O-methyltransferase, family 2	IPR001077	-	-
Sma3	Winged helix-turn-helix transcription repressor DNA-binding	IPR011991	-	-
Sma3	Plant methyltransferase dimerisation	IPR012967	-	-
Sma3	O-methyltransferase, COMT, eukaryota	IPR016461	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NU35

Fln msg: Distance to subject end: 334 aas, your sequence is shorter than subject: 53 - 384

Fln protein: MAASMDSTDRVLANGGQQINSSVESAAIHEVQLYEMILSAAKPMALKAAVSLN

Protein Length: 54

Fln nts: AAGCTCCATTACATACTGCTCAC_-_ATGGCAGCCTCTATGGACTCGACGGATCGTGTTTTGGCTAATGGCGGGCAACAGATCAACTCATCAGTTGAATCTGCAGCGATCCATGAAGTCCAGCTTTACGAGATGATACTCTCTGCTGCCAAGCCCATGGCTTTAAAAGCAGCCGTGTCGCTCAACA

Fln Alignment:

HA8LWWM01ECPLE___MDSTDRVLANG-GQQINSSVESAAIHEVQLYEMILSAAKPMALKAAVSL
A9NU35________________MESIDRVFSRGTGQQMISSCESAATQELQLYEMMFSAVKPMALKAAVLL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain